Bombus pyrosoma: 122577743
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Entry
122577743 CDS
T07776
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03022
Basal transcription factors
bpyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122577743
09124 Replication and repair
03420 Nucleotide excision repair
122577743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpyo03021
]
122577743
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122577743
Transcription machinery [BR:
bpyo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122577743
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122577743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
122577743
NCBI-ProteinID:
XP_043605203
LinkDB
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Position
LG2:complement(6681980..6685727)
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AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGSSSIFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPVLLQLYRDLVITQVISSEEFWSQHAAEYTQAKKSQRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKRKHQENVPHKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQSGIDDPLVDITSFEDQTLDDNYGNGPSKSDKVSGNIVHQSM
IKRFNQHSIMVLKASTAKQSTQSIQPQLNGSTPSASKTTTLSNQLDERPKTKKLRIQEKL
IYDDLDTTHDVNTNNSAPLNLNHIDRYLHGPVPGYGNTEPTSEELLMTLNQLRKEVNGWL
AGNSIPRQLATSLVSPAAAVSALGELTPGGSLMKGFREESLGQLIPKDLEKELRNVYVCT
CELLRHFWRSFPPTTPQLEEKAIRMHEALHRFHSAKLKPFEDRVQRDFSAVSQHLTSHLN
QLLNTAYRKFAVWQQRKMQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacatcatcggaagatgttctaatgcaagtaggacaagttcgttataaaaaagga
gatggcactttatatgtcatgaatgaaagaatagcctggatgcttgataacagagacact
gtatcagtcagccacaaatatgctgacattaagttacaaaagatatcaccagaaggaaaa
tcaaaaatacaattacaagttgtattacatgatggttcatcatctatatttcattttgta
aacagaaatgggcaagaggcacaaattaaagatcgtgatgatgtaaaagaattacttcag
caattattaccaaaatttaaaagaaaagtaaataaagaattggaagaaaaaaatagaatg
cttcaagaaaatcctgtattgcttcagttatacagagatttggttattacacaagttatt
tcatctgaagaattttggtcacaacatgctgcagaatatacccaagctaaaaaaagtcaa
agacaagaaataggagtaaatagtgcttttctggctgacataaaaccacaaactgatggt
tgtaatggattgaaatataatttaactgttgatattatagaatgtatatttaagacttat
ccagcagtaaaaagaaaacatcaagaaaatgtgcctcataaaatgtcagaatccgatttt
tggacaaaattctttcagtcacattattttcatcgagatcgtatcaatgcagggaccaag
gatctttttaccgaatgtgccaaaatagatgatcaagaacttaaaaaagatattcaatcg
ggtattgatgatccattggtggatataacttcttttgaggatcaaactttagatgataat
tatgggaatggacctagtaaatctgacaaagtttcaggaaatattgtacatcaaagtatg
attaagagatttaatcaacatagtatcatggttttaaaggccagcactgccaagcaatct
acacaatccattcaaccacaattaaatggatcaacgccatcagcaagtaaaactacaaca
ctgtctaatcagttagatgaacgaccaaagactaaaaaacttagaatacaagaaaaatta
atttatgatgatcttgataccactcatgatgttaatacaaataatagtgcaccattaaat
ttgaatcatatagacaggtatttacatggtccagtgccaggatatggtaatacggaaccg
acgtctgaagaacttcttatgacattaaatcaattaagaaaggaagtaaatggttggcta
gcaggaaatagtataccaaggcaattagcaacatcattagttagtccagctgcagcagtc
tctgccttaggagaattaactccaggtggctctttaatgaaaggcttcagagaagaaagt
cttggacaattaataccaaaggatttagaaaaagaactacgtaatgtatatgtgtgtaca
tgtgaacttctaaggcatttttggcgaagtttcccacctacaactccacagcttgaagaa
aaagctattagaatgcacgaagcattacatagatttcattctgctaaacttaaacctttt
gaagatcgtgttcaacgagatttttctgctgttagtcaacatttaacgagtcatttaaat
caactattaaatacagcgtatagaaaattcgcagtttggcaacaacgtaagatgcaaatg
aggtag
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