Bombus pyrosoma: 122577944
Help
Entry
122577944 CDS
T07776
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122577944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122577944
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122577944
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122577944
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122577944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DM10_dom
Motif
Other DBs
NCBI-GeneID:
122577944
NCBI-ProteinID:
XP_043605610
LinkDB
All DBs
Position
LG3:10511950..10517561
Genome browser
AA seq
1162 aa
AA seq
DB search
MESDDQGQVFDNEKFNDIHVNGKDNSLGEKVLSIRSEESIFNEASKEIDNFMKSNIKTKK
DSIELNNDNGTGTIDCSGQKKLKKQVQTGEITPFQAIEKQFDLLKTKGTFNKSSHLLDLE
KYLRQQAELAKQRKRLKENSKASKYTSNNTVTIKKPKLLNTHPKEFKIVKKTKIKANKKK
LVSEFDTSKSLNKNNDINYETENSKFNKVENSTKEAKHSKNEFISCNSSKGNTKETLIEN
TTNIKFADITNDSESEYVPSDEQTDSADEEKSCKKRKSLTKSVHTKRVLDDGNEEMYRER
VENSGYPKDEPLHKIDNLFKIPQSIWKKLYKYQKVSVQWLWELHLRGLGGLLGDEMGLGK
TVQVIAFLAGLDCSELLSDGGRFRGLGPTIIVCPATLMEQWVKHFHEWWPILRVVVLHQC
GTYNGNLEYLMHSLKSGGVLITSYSGMLIHKDLLVTSQWHYVILDEGHKIRNPQAKISKA
VKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCATPITRGGYTNASP
LQEAIALQVATMLRDTITPYMLRRTKNDVQHHLSLPEKNEQVLFCSLTGEQKELYKEYLR
SADVSFILHEKSNSVSRRYRARLLIALSVLRKICNHPDLFLYTNPVDSDEDIDVSNEALE
KFGYWKRSGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMHVLESLVQSEEYSYLRMDGITS
MSQRQETIRLFNKDPSYFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPATDAQARARAWR
IGQNKKVTIYRLITAGTIEEKMYHRQIFKILLANKVLEDPRQHKLFKTSDLVELFNFNES
INNNSSEIDQLFGQSRLVSSSTKFSSNKIEKMRKLAATLSKNISQNTSNSTSVIQIAHAT
ENHYVSSCHNNNIDQDILKHNYEIFKDNLTKEGIKNESNLLKKNEDVPFSATQESTNDNN
IQNKISKNIEYNADILNNKLEDEDHTLTSRSNSDIKIHGTSNKATVQCLSNDANITEILD
RSNETVTCNMNMNEDTLSKLNKNHCKEKRKRSSRLEEHAASALFEGERVSHLIGRRLGRS
LTEEPKPIEDDQYVLEKLFAKASVTSAFQHETVLSNSEYNSDDKNPMQRLARETAQENMD
SIRKSRKWCWKPMWNSMSPKNY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgatgatcaaggacaagtttttgataatgaaaaatttaatgatatacacgta
aatgggaaagataacagtttgggagagaaggttttgtcaataagaagcgaggaaagcatt
tttaatgaagcatcaaaagaaattgataattttatgaaatcaaatataaaaacaaaaaag
gattcaatagaactaaacaatgataatggaactggtactatagattgttcaggacaaaaa
aaattaaaaaaacaagttcaaactggagagattacaccctttcaagcaattgaaaaacag
tttgatttgttaaaaactaaagggacatttaataaatcctctcatttacttgatcttgaa
aaataccttcgacagcaggctgaacttgccaaacaaagaaaacgtttgaaagaaaattca
aaggcatctaagtatactagtaataacacagtaacaattaaaaaaccaaaattattaaat
actcatcctaaagaatttaaaatagtgaaaaaaacaaaaatcaaagctaataagaagaaa
ttagtttctgaatttgatacatcaaaaagcttaaataaaaacaatgatattaattatgaa
acagaaaatagtaagtttaataaagttgagaattctaccaaagaagctaaacattcaaaa
aatgaattcatttcctgtaatagttccaaaggtaatactaaagagacattgattgaaaat
acaacaaacattaaatttgcagatataaccaatgattctgaaagtgaatatgtaccgagt
gatgaacaaacagattcagcggatgaagaaaaatcatgtaaaaagagaaaatctcttacc
aaatctgttcatacaaaaagagttttggatgatggaaatgaagagatgtatagagaaagg
gtagagaatagtggttatccaaaggatgaaccactacacaaaatagataatttatttaaa
atccctcaatctatatggaaaaagttatataaatatcagaaagtgtctgtacaatggttg
tgggaactgcatcttcgtggcttaggagggttactaggtgatgaaatgggtttgggaaag
actgttcaagtaattgcatttcttgcaggtttagattgtagtgaattactgtcagatggt
ggaaggttcagaggtttaggaccaactataattgtttgtccagctactctaatggaacaa
tgggtaaagcattttcatgaatggtggcctattttaagagtggttgttctacatcaatgt
ggaacttataacggtaatttggagtatttaatgcactctttaaaatctggtggtgtatta
attacttcttattctggtatgcttatacataaagatttacttgtaaccagtcaatggcac
tatgtcatacttgatgaaggtcacaagataagaaatccacaagcaaagatcagtaaagca
gtaaaggaattctctacaccacatcgacttttgttaacgggtagccctatgcaaaattcc
ttaaaagaactatggtccctctttgattttattctacctggcaagttaggcactttacct
gcatttttggagcattgtgcaacccctataactcgtggaggatatacgaatgcttctcct
ttgcaagaagctatcgcgcttcaggtcgctacaatgcttagagatactattacaccatat
atgctccgaagaacaaaaaatgatgtgcaacatcatcttagtctaccagaaaaaaacgaa
caggtactgttttgcagtttaacaggagaacaaaaagaactatataaagaatatttacgt
tctgcagatgttagtttcattttgcatgaaaagagtaattcagtaagcagaagatacagg
gctcgcctcctcatagcattatcagtgcttagaaagatatgtaatcatcctgatttgttt
ctttatacaaatccagttgattcagatgaagacattgatgtatcaaatgaagcattggag
aaatttggatactggaagcgctctggtaaaatgatagtggttcggtcccttcttaaaatt
tggaaaaaacagggacatagagtacttctttttactcaagggagacaaatgatgcatgtt
ttagaatctctagtacaaagcgaagaatattcttatttaagaatggatggaattacttct
atgtcacaacgacaagaaacaattcgtttatttaataaggatccatcatattttgtgttt
ttgttaactacgcgtgttggaggtctgggagtaaatttgactggagcaaatcgagtagtt
atttatgatccggattggaatccagcaactgatgctcaagcaagagcacgtgcatggaga
attggacaaaacaaaaaagttaccatttatagacttattactgctggtactattgaagaa
aagatgtatcacagacaaatatttaaaatacttcttgcaaataaggttttagaagatcca
cgtcaacataaattatttaaaacttccgatttagttgaactttttaattttaatgaatct
atcaataataattctagtgaaatagatcaattattcggacaatctagactagtttcttcg
tctaccaaattttcatctaataaaattgaaaaaatgcgaaaattagcagctacgcttagt
aaaaatataagtcaaaatacctcaaactctacatctgtaatacaaatagcacacgctaca
gagaatcattatgtttcaagttgccataataataatattgatcaagatattttaaaacac
aattatgaaatattcaaggataatttaacaaaagaaggtattaaaaacgagagtaatctt
cttaaaaaaaatgaagatgtacctttttctgcaactcaagaaagtaccaatgacaacaat
atccaaaataaaatttcaaaaaatattgaatacaatgcagacatcttaaataataaactg
gaagatgaagatcatacattaacaagtagatcaaattctgatattaaaatacatggaaca
tcaaataaggctactgtacaatgtctatctaatgatgctaatataactgaaattttagat
agaagtaacgaaacagtaacatgtaatatgaatatgaatgaagatacattgtcaaaatta
aataaaaatcattgcaaagaaaaaagaaaaagaagttcacgattagaagagcatgctgct
tcagctctatttgaaggagaacgtgtctcacatttaattggacgacgtcttggacgttct
ctgacagaggaacctaaaccaattgaagatgatcaatacgtcttagaaaaattatttgcc
aaagcgagcgtgacttctgcttttcaacacgaaacagtattatcaaattcagaatataat
tctgatgacaaaaatccaatgcaacgattagcgcgcgaaacagcgcaagaaaatatggac
agtattcgtaaatctcgtaaatggtgttggaaacccatgtggaattctatgtcaccaaaa
aattactga
DBGET
integrated database retrieval system
