Burkholderia pyrrocinia: ABD05_00060
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Entry
ABD05_00060 CDS
T03962
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00300
Lysine biosynthesis
bpyr01100
Metabolic pathways
bpyr01120
Microbial metabolism in diverse environments
bpyr01230
Biosynthesis of amino acids
Module
bpyr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABD05_00060
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bpyr01002
]
ABD05_00060
Enzymes [BR:
bpyr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ABD05_00060
Peptidases and inhibitors [BR:
bpyr01002
]
Metallo peptidases
Family M20
ABD05_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AKL98730
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All DBs
Position
1:15984..17123
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AA seq
379 aa
AA seq
DB search
MSATLALTEQLIARASVTPDDQHCQQIMTGRLTALGFECETIASHGVTNLWAVKRGTDGR
DGKLLAFAGHTDVVPTGPLEQWTSPPFIPAHRDGKLYGRGAADMKTSLAAFVVASEEFVA
AHPGHRGAIAFLITSDEEGPATDGTVKVVELLQARGERLDYCIVGEPTSTAELGDVVKNG
RRGSMSGELVVKGVQGHIAYPHLAKNPIHLLAPALAELAAEQWDEGNEYFPPTTWQVSNL
HAGTGATNVIPGHADLLFNFRFSTASTVEGLQARVHAILDKHGLEYTLKWSVSGLPFLTP
RGELSNALENAIRTETGITTELSTTGGTSDGRFIARICPQVIEFGPPNGSIHKIDEHIEV
RFVDPLKNVYRRVLEQLIA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccctagcccttaccgaacagttgatcgcccgcgcgtccgtgacgcccgac
gaccagcattgccagcagatcatgaccgggcgcctcaccgcgctcggcttcgaatgcgag
accatcgcgtcgcacggcgtgaccaacctgtgggccgtcaagcgcggcaccgacggccgc
gacggcaagctgctcgcattcgcgggccacaccgacgtcgtgccgaccggcccgctcgag
cagtggacctcgccgccgttcatccccgcccatcgcgacggcaagctgtacggccgcggc
gcggccgacatgaagacgtcgctcgcggcgttcgtcgtcgcgtccgaggaattcgtcgcg
gcccatcccggccaccgcggcgcgatcgcgttcctgatcacgagcgacgaggaaggcccg
gccaccgacggcaccgtgaaggtcgtcgaactgctgcaggcacgcggcgagcgcctcgac
tactgcatcgtcggcgagccgacgtcgaccgccgagctcggcgacgtcgtcaagaacggc
cgccgcgggtcgatgtcgggcgaactggtcgtcaagggcgtgcagggccatatcgcgtat
ccgcacctcgcgaagaacccgatccacctgctcgcaccggcgctcgccgagctcgccgcc
gagcagtgggacgaaggcaacgaatatttcccgccgaccacctggcaggtgtcgaacctg
cacgccggcaccggcgcgaccaacgtgatccccggccacgccgacctgctgttcaacttc
cggttctcgaccgcgagcacggtcgagggcctgcaggcacgcgtgcacgcgatcctcgac
aagcacggcctcgaatacacgctgaagtggtcggtgagcggcctgccgttcctgacgccg
cgcggcgaactgtcgaatgcgctggaaaacgcaatccgcaccgagaccggcatcacgacc
gagctgtcgaccaccggcggcacgtcggacggccgtttcatcgcgcgcatctgcccgcag
gtgatcgagttcggcccgccgaacggcagcatccacaagatcgacgagcacatcgaagtg
cgcttcgtcgacccgctcaagaacgtgtaccgccgcgtgctcgaacaactgatcgcctga
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