KEGG   Burkholderia pyrrocinia: ABD05_00495
Entry
ABD05_00495       CDS       T03962                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpyr  Burkholderia pyrrocinia
Pathway
bpyr03410  Base excision repair
bpyr03430  Mismatch repair
bpyr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ABD05_00495
   03430 Mismatch repair
    ABD05_00495
   03440 Homologous recombination
    ABD05_00495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpyr03400]
    ABD05_00495
DNA repair and recombination proteins [BR:bpyr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     ABD05_00495
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     ABD05_00495
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ABD05_00495
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4 HTH_3
Other DBs
NCBI-ProteinID: AKL98804
UniProt: A0A0G3WMS7
LinkDB
Position
1:105550..107247
AA seq 565 aa
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPTDIETALARLVPPTELKGCADA
ASLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIAGFHLRDALDLVSKREPDLI
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPASAL
IAYRLVADTWNGVTRVQLIVEHAAG
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccggatcgttacccgccccgtcgcgcccgccgacgccgaagtgctcgcgcgccac
ggcctgcatcccgtcctcgcacgcctgtacgcgtcgcgcggcgtgcagtccccgaccgac
atcgagaccgcgctcgcacgcctcgtcccgcccaccgagctgaaaggctgcgccgacgcg
gcgtcgctgcttgccgacgcgatcgccgacaaacgacgcctgctcgtcgtcgccgactac
gactgcgacggcgcgaccgcgtgcgcggtcgcggtgcgcggcctgcggatgttcggcgcg
cagatcgactacctggtgccgaaccgcttcgaatacggctacggcctcacgcccgagatc
gtcgagctcgcggccgcgcgcaagcccgacctgctgatcaccgtcgacaacgggatcgca
agcgtcgcgggcgtcgaagccgcgaacgcacgcggcatcgacgtgctcgtgaccgaccac
cacctgcccggcgacgcgctgcccgccgcccgcgcgatcgtcaacccgaaccagcccggc
tgcgcgttcccgagcaagcacatcgccggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgaactgcgccgccgcggcgcattcgcaagcaaggaagccgagccgcgcctc
gacggcctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtgcggctcgacggc
aacaaccgtgtgctcgtcgcacaggggctgcagcgcatccgcaacggccgcatgcagccg
ggcatcgccgcgctgttccgcgccgccgcgcgcgaagcgcgcaccgcgtcgggcttcgac
ctcggcttcggcctcggcccgcggctcaacgccgcggggcggctgtccgacatgtcgctc
ggcatcgagtgcctgatcaccgacgacatcggccgcgcgtgggatctcgcgcagcagctc
gacgtgatgaaccgcgagcgccgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgccgacgtcgacccggccgacgcgtgcacgatcacgctgttcaaccccgagtgg
caccagggcgtgatcggcatcgtcgccgggcggctcaaggaaaaattccaccgcccgtcg
ttcacgttcgcgcacgcggacgacgaaggcaagcgggtcaaggggtcgggccggtcgatc
gccggcttccacctgcgcgacgcgctcgacctcgtgtcgaaacgcgagccggacctgatc
gtcgcgttcggcggccatgcaatggcggccggcctcacgctcgacaccgagaacgtgccg
cgcttcgcggccgcgttcgaggccgtcgcgcgcgaatggctgtccgacgacgcgctcgcc
cgcgtgatcgagaccgacggcgaactcgaggacgcatacttcacgccgcagttcgtcggg
ctgctcgacgaggccgtctgggggcaaggttttccggccccgcttttctccggcgaattc
gacgtcgtgtcgcagtcgctcgtgaaggaaaagcacctgaagctgcagcttgcgcgcggc
cgccagcgcttcaacgcgatctggttcaaccacaccgagccgctgccggcgagcgcgctg
atcgcgtaccgcctcgtcgccgacacgtggaacggcgtcacgcgcgtccagttgatcgtc
gaacacgcggccggctga

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