Burkholderia pyrrocinia: ABD05_02200
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Entry
ABD05_02200 CDS
T03962
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00330
Arginine and proline metabolism
bpyr01100
Metabolic pathways
bpyr01110
Biosynthesis of secondary metabolites
Module
bpyr_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ABD05_02200
Enzymes [BR:
bpyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
ABD05_02200
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AKL99104
LinkDB
All DBs
Position
1:complement(473106..475385)
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AA seq
759 aa
AA seq
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MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCF
ILSIDDDELMLGETGQDGELPELATAIIELRAFVTEVRRRNADIPIFLYGETRTSRHLPN
DILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFFKELVKYADEGSYSWHCPGHS
GGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHL
FFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTGAIPVFLTPTRNHFGIIG
PIPRDEFKPENIRKKIEANPFAREALRENPDMKPRILTITQSTYDGVVYNVEMIKDLLGD
LLDTLHFDEAWLPHATFHDFYRDMHAIGDGRPRTGALVFATHSTHKLLAGISQASQIVVQ
DSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRR
AMRKVDAEYGDDWFFSVWGPDNLSEEGIGSREDWMLKPNDHWHGFGPLAEGFNMLDPIKA
TIITPGLDVDGEFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVT
ELQQFKDDYDNNQPLWRVLPEFVAQHPRYERVGLRDLCAQIHDVYRANDIARLTTEMYLS
DMEPAMKPSDAFAKLAHRKIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNY
LRFARDFNERFPGFHTDIHGLVAEEVNGRVEYFVDCVRD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgtttccccgtcgtcatcatcgacgaagatttccgctccgagaacatctcg
ggctccggcatccgggcgttggccgaagcgatcgagaaagagggcgtcgaagtcctcggc
ctcacgagctacggcgatctgacgtcattcgcgcagcagtcgagccgcgcgtcgtgcttc
atcctgtcgatcgacgacgacgaactcatgctcggcgaaaccggccaggacggcgagctg
cccgagctcgcgaccgcgatcatcgagctgcgcgcgttcgtgaccgaagtgcgccgccgc
aacgcggacatcccgatcttcctgtacggcgagacgcgcacgtcgcggcatctgccgaac
gacatcctgcgcgagttgcacggcttcatccacatgttcgaggacacgccggagttcgtc
gcgcgtcacatcatccgcgaggcgaaggtctatctggactcgctcgcgccgccgttcttc
aaggaactcgtcaagtacgcggacgaaggctcgtactcgtggcactgcccgggccactcg
ggcggcgtcgcgttcctgaagaacccgctcggccagatgttccaccagttcttcggcgag
aacatgctgcgcgcggacgtctgcaacgcggtggacgaactcggccagctgctcgatcac
acgggcccggtcgcggcgtccgagcgcaatgcggcacgcatcttcagcgccgatcacctg
ttcttcgtgaccaacggcacgtcgacgtcgaacaagatcgtctggcacgcgacggtcgcg
cccggcgacatcgtgctggtcgaccgcaactgccacaagtcgatcctgcacgcgatcacg
atgacgggcgcgatcccggtgtttctcacgccgacgcgcaaccatttcggcatcatcggg
ccgatcccgcgcgacgaattcaagccggagaacatccgcaagaagatcgaggcgaacccg
ttcgcgcgcgaggcgctgcgcgagaacccggacatgaagccgcggatcctgacgatcacg
cagagcacgtacgacggcgtcgtctacaacgtcgagatgatcaaggacctgctcggcgac
ctgctcgacacgctgcacttcgacgaagcgtggctgccgcacgcgacgttccacgacttc
taccgcgacatgcacgcgatcggcgacggccgcccgcgcacgggtgcgctcgtgttcgcg
acgcactcgacgcacaagctgctggcgggcatctcgcaggcgtcgcagatcgtcgtgcag
gattcggagaaccgcacgttcgacaagcaccgcttcaacgaggcgtacctgatgcacacg
tcgacgagcccgcagtacgcgatcatcgcgtcgtgcgacgtcgccgccgcgatgatggag
ccgccgggcggcaccgcgctcgtcgaggaatcgatcgccgaggcgatcgacttccgccgc
gcgatgcgcaaggtggacgccgaatacggcgacgactggttcttcagcgtgtggggcccg
gacaacctgtcggaagagggcatcggttcgcgcgaagactggatgctgaagccgaacgac
cactggcacggcttcggcccgctcgcggaaggcttcaacatgctcgacccgatcaaggcg
acgatcatcacgccggggctcgacgtcgacggcgagttcggcgagacgggcattccggcc
gcgatcgtcacgaagtacctggccgagcacgggatcatcgtcgagaagaccggcctgtac
tcgttcttcatcatgttcacgatcggcatcacgaagggccgctggaactcgatggtgacc
gagctgcagcagttcaaggacgactacgacaacaaccagccgctgtggcgcgtgctgccg
gagttcgtcgcgcagcatccgcgctacgagcgcgtcggcctgcgcgacctgtgcgcgcag
atccacgacgtgtaccgcgcgaacgacatcgcccgcctgacgaccgagatgtacctgtcg
gacatggaaccggcaatgaagccgtcggacgcgttcgcgaagctcgcgcaccgcaagatc
gaccgcgtgccgctcgacgagctcgaaggccgcgtgacgagcatcctgctcacgccgtac
ccgccgggcattccgctgctgatcccgggcgagcgcttcaacaagacgatcgtgaactac
ctgcggttcgcgcgcgacttcaacgagcgtttcccgggcttccacaccgacatccacggc
ctcgtcgcggaagaggtgaacggccgcgtcgagtacttcgtcgactgcgtgcgcgactga
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