KEGG   Burkholderia pyrrocinia: ABD05_04010
Entry
ABD05_04010       CDS       T03962                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
bpyr  Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:bpyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpyr03019]
    ABD05_04010
Messenger RNA biogenesis [BR:bpyr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     ABD05_04010
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 AAA_28 AAA_22 AAA_18 AAA_29 CoaE FtsK_SpoIIIE SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AKL99426
LinkDB
Position
1:864239..865147
AA seq 302 aa
MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAQDGQHRLAVAIDARS
SASLDEMPGLIRELSREHDVRVLFLNASTPALIQRFSETRRRHPLSGSLSHDADVGLLSS
LEEAIERERDLVAPLAEFGHQIDTSTLRANVLRTWVKRFIEQKNNDLMVMFESFGFKRGV
PLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHAFLMKWLPHF
RDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAHEANVIVRHRDAPVDVDASSRLVSEVD
RP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcgcatcgtcctaatcaccggcatctccggctcaggcaagtccgtcgcgctgaacgcg
ctcgaagacgcaggctattactgcgtcgacaacctgccgccgcatgtgctccccgaactc
gcccgctacctcgcccaggacggtcagcaccggctcgcggtcgcgatcgacgcgcgctcg
agcgcatcgctcgatgaaatgcccggcctgatccgcgagttgtcgcgcgagcacgacgtc
cgcgtgctgttcctcaacgcgagcaccccggcgctgatccagcgcttctccgaaacgcgc
cgccgccatccgctgtccggctcgctgtcgcacgatgcggacgtcggcctgctgtcgtcg
ctcgaggaagcgatcgagcgcgaacgcgacctcgtcgcgccgctcgccgagttcggccac
cagatcgatacgagcacgctgcgcgcgaacgtgctgcgcacgtgggtcaagcgcttcatc
gagcagaagaacaacgacctgatggtgatgttcgaatcgttcggcttcaagcgcggcgtg
ccgctcgacgccgacctgatgttcgacgtgcgcgcgctgccgaatccgtactacgaccac
gagttgcgcccgctcaccgggctcgaccagccggtcatcgcctttctcgacgcactgccg
atcgtccaccagatgatcgacgacatccatgcgttcctgatgaaatggctgccgcacttc
cgcgatgacaaccgcagctacctgaccgtcgccatcggctgcacgggcggccagcatcgc
tcggtgttcatcgcggaaacgctcgccgcgcgcctcgcgcacgaggcgaacgtgatcgtg
cggcatcgtgacgcgccagtggatgtcgacgcgtcgtcgcggctcgtctccgaggtcgac
cgaccctag

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