Burkholderia pyrrocinia: ABD05_10850
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Entry
ABD05_10850 CDS
T03962
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpyr03032
]
ABD05_10850
03036 Chromosome and associated proteins [BR:
bpyr03036
]
ABD05_10850
03400 DNA repair and recombination proteins [BR:
bpyr03400
]
ABD05_10850
DNA replication proteins [BR:
bpyr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABD05_10850
Chromosome and associated proteins [BR:
bpyr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ABD05_10850
DNA repair and recombination proteins [BR:
bpyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ABD05_10850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AKM00662
UniProt:
A0A087NQQ7
LinkDB
All DBs
Position
1:2355042..2355365
Genome browser
AA seq
107 aa
AA seq
DB search
MTKSELVAQLASRFPQLVLKDADFAVKTMLDAMSDALAKGHRIEIRGFGSFGLNRRPARV
GRNPKSGEKVQVPEKFVPHFKPGKELRERVDGRAGEPLKADDPDDER
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagttggtcgcgcagctggcatcgcgatttccgcaacttgtcctcaag
gatgcggatttcgcggtgaaaacgatgctcgatgcgatgtccgatgccctggcgaaaggg
catcgcatcgaaattcggggtttcggcagcttcggcctcaaccgtcgcccggcacgcgtc
ggacgcaacccgaagtcgggggagaaagtgcaggtgcccgagaagttcgtgccgcacttc
aagcctggcaaggaattgcgtgaacgtgtcgacggccgcgccggtgagccgctgaaggct
gacgatccggacgacgagcgttga
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