Burkholderia pyrrocinia: ABD05_11815
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Entry
ABD05_11815 CDS
T03962
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABD05_11815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpyr03400
]
ABD05_11815
Enzymes [BR:
bpyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABD05_11815
DNA repair and recombination proteins [BR:
bpyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABD05_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
RecD_N
AAA_22
AAA_25
MukB
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
AKM00829
LinkDB
All DBs
Position
1:2569548..2571842
Genome browser
AA seq
764 aa
AA seq
DB search
MNASDDLLEFTGGLVARLPEPADFGIALAEGFARRIGDLARRAGAPAAAARWAARAAFAT
SRATAGGHVCVALGALAQRYEEPLDEIRAALAASGVVAFGTLARGDERPLIVDRHDHLYL
SRYFDYERRLADALVAQAGVAAPDEGLSPDRLRDNLARYFGPATGDVDWQRVAAIVALTG
RVTIVSGGPGTGKTTTVVGVLACLLDAHPGLRIALAAPTGKAAQRMQEALHARAGDLPPE
LAARLPDTSYTLHRLLGGGGAAGFRHHRDNPLPYDLIVVDEASMIDVALAAHLLDALAPG
ARLVLLGDKDQLAAVEAGAVFAELSARPAFTAAARTRIALALGIDEAAFVAALPVPDEAA
TVPAANPVSTAAPAQVSASASAVASRKRASRPRADARQASLFDDEPQDDAIAAADVTPSA
SAGPALTDAGDIGDGGSAPAWIEVDELAWLDAVELPPLDAGDAALVSVASTLPGEPAASP
ATPAPAPLADCVVWLERNYRFGLDSPIGRLSLAIRRGDVQAALDALPADDAAAASFHDDA
GESLASSTVERLARRFGAYLDALRGVLAAPVPDPLPLFDALNRFRILCATRSGLRGAEHV
NALVAAHVRHAARVPLAVGAHWFTGRPIMVTRNDYALGLFNGDIGIALPDAHGVLRVWFR
RADGTARAVSPAALPPHETAFALTVHKSQGSEFDEAALVLPASFGRVLTRELVYTAVTRA
RTRVQVIGPRRVLAQAVATRTQRDSGLAARVDEAIARRRTEASR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgtccgacgacttgctcgaatttaccggcggcctcgtcgcgcggctgcccgag
cccgccgatttcggcattgcgctcgcggaaggtttcgcgcgccgcatcggcgacctcgcg
cggcgcgccggcgcaccggccgcggccgcgcgctgggccgcgcgcgccgcgttcgcgacg
agccgcgcgaccgcgggcggccacgtgtgcgtcgcgctcggcgcgctcgcgcagcgctac
gaagaaccgctcgacgagatccgcgcggcgctcgccgcgagcggcgtggtcgcgttcggc
acgctcgcgcgcggcgacgagcggccgctgatcgtcgaccggcacgaccatctgtacctg
tcgcgctatttcgattacgaacggcggctggccgatgcactcgtggcgcaggccggcgtc
gcggcgccggacgaagggctgtcgcccgaccggttgcgcgacaatctcgcgcgttacttc
gggcccgcgaccggcgacgtcgactggcagcgcgtcgcggcgatcgtcgcgctgacgggc
cgcgtgacgatcgtcagcggcggccccggcaccggcaagacgacgaccgtcgtcggcgtg
ctggcctgtctgctcgacgcgcacccggggctgcgcatcgcgctggccgcaccgaccggc
aaggccgcgcagcggatgcaggaagcgctgcatgcacgggccggcgacctgccgcccgaa
ctcgcggcgcgcctgcccgacacgtcgtacacgctgcatcgcctgctgggcggcggcggg
gcggccggcttccggcatcatcgcgacaatccgctgccgtacgacctgatcgtcgtcgac
gaggcgtcgatgatcgacgtcgcgctcgccgcgcatctgctcgacgcgctcgcgccgggc
gcgcggctcgtgctgctcggcgacaaggatcaactggccgcggtcgaggcgggtgcagtg
ttcgcggaactgagcgcgcggccggcgtttaccgccgcggcgcgcacgcgcatcgcgctg
gcgctcggcatcgacgaggcggcgttcgtcgcggcgttgccggtgccggacgaagcggcg
actgtgcctgctgcgaatccggtttccactgcggcaccggcccaggtttccgcttcggca
tctgccgtcgcttcgcgcaaacgggcgtcgcgtccgcgcgccgatgcgcgacaggcgtcg
ctgttcgacgacgagccgcaggacgacgcgattgccgcggccgacgtcacgccatcggcg
tccgccggtccggcattgaccgatgcaggcgatatcggcgatgggggcagcgcacctgca
tggatcgaagtcgacgaactcgcatggctcgacgccgtcgagctgccgccgctcgacgca
ggcgacgcggcgcttgtgtcggtggcgtcgacattgcctggcgaacccgctgcatcgccc
gccacgcccgcaccggcaccgctcgccgactgtgtcgtgtggctcgaacgcaattaccgc
ttcggcctcgattcgccgatcgggcggctgtcgctcgcgatccgccgcggcgacgtgcag
gctgcgctcgacgcgctgcccgcggacgacgcggctgccgcgtcgttccacgacgatgcg
ggcgagtcgctcgcgtcgtcgacggtcgagcggctcgcgcggcggttcggcgcctacctc
gatgcattgcgcggcgtgctggccgcgccggtgcccgatccgctgccgctgttcgatgcg
ctcaaccggttccggatcctgtgcgcaacgcgcagcggcttgcgcggcgcggagcacgtc
aacgcgctcgtggccgcgcacgtgcggcatgcggcgcgcgtgccgctcgcggtcggcgcg
cactggttcaccggacggccgatcatggtgacgcgcaacgactatgcgctcgggctgttc
aacggcgacatcggcattgcgttgcccgacgcgcacggcgtgttgcgcgtgtggttcagg
cgtgcggacggcaccgcgcgcgccgtgtcgccggccgcgctgccgccgcacgaaacggcg
ttcgcgctgacggtccacaaatcgcagggctcggaattcgacgaagccgcgctcgtgctg
ccggcatcgttcggccgcgtgctcacgcgcgaactcgtctatacggccgttacgcgggca
cgcacgcgcgtgcaggtgatcgggccgcggcgcgtgctggcgcaggcggtcgcgacgcgc
acgcagcgcgattcggggctcgcggcccgcgtcgacgaggcgattgcacggcgacgcacg
gaggcttcgcgatga
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