Burkholderia pyrrocinia: ABD05_17285
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Entry
ABD05_17285 CDS
T03962
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr03030
DNA replication
bpyr03410
Base excision repair
bpyr03420
Nucleotide excision repair
bpyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABD05_17285
03410 Base excision repair
ABD05_17285
03420 Nucleotide excision repair
ABD05_17285
03440 Homologous recombination
ABD05_17285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpyr03032
]
ABD05_17285
03400 DNA repair and recombination proteins [BR:
bpyr03400
]
ABD05_17285
Enzymes [BR:
bpyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABD05_17285
DNA replication proteins [BR:
bpyr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABD05_17285
DNA repair and recombination proteins [BR:
bpyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABD05_17285
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABD05_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AKM02037
LinkDB
All DBs
Position
2:complement(211367..214120)
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDRITLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIAHAGDIKGVVGDNLRRALDFLP
LGRTLVTVDTACDLAPHLESIEASLKSDGEARDLMRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVVAADIVREYDTIQTWEQFDAWFAKIDAAALTAFDTETTALDPMLARLVG
LSFSVEPGKAAYLPVAHRGPDMPEQLPIDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVVESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AQAAEYAAEDADITLQLHHALYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDAL
LQAQSTEIATRLIELEAQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKVLLEHRGLSKLKSTYTDKLPRMVNLATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVHSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRAIAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDKLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgtgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgacctcgcattgcaggtcgaaccgatccacggc
gccgtgcgcgcgctcggctggccgttgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatcttgcgcagctcgtgaccgaccgcatcacgctcgtcaatacgatgaccaac
gagacgctcgaccgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gactacctggcattgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctgtcgcaatacgacagcctcgacggcgtcatcgcgcac
gcgggcgacatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcacgctcgtgacggtcgacacggcctgcgatctcgcgccgcatctcgaatcg
atcgaagcgtcgctgaagagcgacggcgaagcgcgcgacctgatgcgcgacatcttcgcg
cgctacggcttcaagacgtggctgcgcgaagtcgacagcgcgcctgcggaaggcggcggc
gccgatgcgccggaaggcgagccggcaccggtggtggcggccgacatcgttcgcgaatac
gacacgatccagacctgggagcaattcgacgcgtggttcgcgaagatcgacgcggccgcg
ctgaccgcgttcgacaccgagacgaccgcgctcgatccgatgctcgcgcggctcgtcggc
ctgtcgttctcggtcgaaccgggcaaggccgcgtacctgccggtcgcgcaccgcggcccc
gacatgcccgagcagcttccgatcgacgaagtgctcgcgcgcctgaagccgtggctcgag
tcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcgctgaacggcatcgagcacgacacgctgctcgaatcgtacgtggtcgaa
tcgcaccgcacgcatgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtatgaagacgtcgccggcaagggcgcgaagcagatcggtttcgacgaagtggcgctt
gcgcaggccgccgaatacgcggccgaggatgccgacattacgctgcagcttcatcacgcg
ctgtatccgcaggtcgcgcgcgaaccgggcctcgagcgcgtgtatcgcgagatcgagatg
ccggtgtcgctcgtactgcgcaagatggaacgcacgggcgtgctgatcgacgacgcgctg
ctgcaggcgcagagcaccgaaatcgcgacgcgtctgatcgagctcgaagcgcaggcgtac
gaactggcgggcggcgaattcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtcgaccgacgaa
gaagtgctgcagaagctggcggaggattacccgctgccgaaggtgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaacctcgca
acgggccgcgtgcatacgaactatgcgcaggccgtcgcggtgacgggccgtctcgcatcg
aacgatcctaatcttcagaacattccggtgcgcacggccgaaggccggcggatccgcgag
gcgttcatcgcatcgccgggccaccggatcgtgtcggccgactattcgcagatcgagctg
cggatcatggcgcacatctcgggcgacgcgtcgctgctgcgcgcgttctcgcagggcgag
gacatccaccgcgcgacggccgccgaggtgttcggcgtgacgccgctggaggtccattcc
gaccagcgccggatcgcgaaggtgatcaacttcgggcttatctacgggatgagcgcgttc
gggctcgcgtcgaacctcggcatcacgcgcgacgcggctaagctctatatcgaccgttat
ttcgcccgctatccgggcgtcgcgcagtacatggaagacacgcgcgcgatcgcgaaggag
aagggctacgtcgaaaccgttttcggtcgccgcctgtggctgccggagatcaacggcggc
aacggcccgcgccgccaggcggccgagcgcgcggccatcaatgcgccgatgcagggtacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgacaag
cttgcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtgcccgacgac
gaactgtcgctcgtgcgcgagaaactgccggaaatgatgtgcggcgtcgcgaagctgaag
gtgccgctcgtcgccgaagtaggcgccggcgcgaactgggaagaggcacactga
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