Burkholderia pyrrocinia: ABD05_18240
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Entry
ABD05_18240 CDS
T03962
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpyr03000
]
ABD05_18240
Transcription factors [BR:
bpyr03000
]
Prokaryotic type
Other transcription factors
Others
ABD05_18240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
MCM
AAA_30
AAA_7
AAA_19
NACHT
AAA_33
AAA_2
BrxC_BrxD
T2SSE
AAA_14
TniB
ATPase_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKM02209
LinkDB
All DBs
Position
2:complement(445174..446793)
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AA seq
539 aa
AA seq
DB search
MRKTVAIGFLGTVLDQGGRAPRRYRKWRPTISLCEQPDLPIDRLELLHPPSYTRLANQVR
DDLARLSPHTDVRLTPLTIHDPWDFEEVYATLHDYARAYPFDLEHEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLVQTGPPQRTDEGPSGPGTLSVIDLDLSRYNRIAQRFTRERDETV
SFLKAGIATRNARFNALIEQLERVAVRSRAPMLLVGPTGAGKSFLAKRVYELKRGRHRLA
GPFIEINCATLRGDAAMSTLFGHVKGAFTGAQSARAGLLRAADGGLLFLDEIGELGLDEQ
AMLLKAIEEKRFLPVGADVEATSDFELIAGTHRDLRLMVAAGTFREDLYARINLWTYELP
GLAERREDIEPNLEFELDRFGREQGEQVRFNVEAKRRYLAFAASPRAAWAGNFRELSASV
TRMATLADAGRITEDLAEQEVERLTRTWSPPGGAGASDTCVDAVFGARAAELDLFDRAQL
ERVLDVCRVSASLSEAGRTLFAVSRQSKKQPNDADRLRKYLARFGLDWDGVRQALELAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagacagtcgcaatcggctttctcggcaccgtgctcgaccagggcggccgcgcg
ccgcgccgctaccgcaaatggcggccgacgatctcgctgtgcgagcagcccgacctgccg
atcgaccggctggagttgctgcatccgccgagctacacgcgcctcgccaaccaggtgcgg
gacgatctcgcgcggctgtcgccgcacaccgacgtgcggctcacgccgctcacgatccac
gacccgtgggatttcgaggaggtctatgcgacgctgcacgactacgcgcgcgcctatccg
ttcgacctcgaacacgaggactacctgattcacatcacgaccggcacgcacgtcgcgcag
atctgctggttcctgctggcggaggcacgctacctgcccgcgcgtctcgtgcagacgggg
ccgccgcagcggaccgacgaagggccgagcgggccgggcacgctgtcggtgatcgatctc
gacctgtcgcgctacaaccggatcgcgcagcgcttcacgcgcgagcgcgacgaaacggtg
tcgttcctgaaggccggcatcgcgacgcgcaacgcgcgcttcaatgcgctgatcgagcaa
cttgagcgcgtggccgtgcgttctcgcgcgccgatgctgctcgtcgggccgaccggcgcc
ggcaagtcgtttctcgcgaagcgcgtgtacgagctgaagcgcggccgccatcggctcgcg
gggccgttcatcgagatcaactgcgcgacgctgcgcggcgacgcggcgatgtcgacgctg
ttcggccacgtgaagggcgcgttcacgggcgcgcagtcggcgcgcgcggggttgttgcgc
gcggcggacggcggcctgctgtttctcgacgagatcggcgaactcgggctcgacgagcag
gcgatgctgctgaaggcgatcgaggagaagcgcttcctgccggtcggcgcggacgtcgag
gcaaccagcgatttcgaactgatcgcgggcacgcaccgcgacctgcggctgatggtggcg
gccggcacgttccgcgaggatctctatgcgcggatcaatctgtggacgtacgaactgccg
gggctcgccgagcgccgcgaggacatcgagccgaacctcgaattcgaactcgaccgcttc
ggccgcgagcagggcgagcaggtgcgtttcaacgtcgaggcgaagcggcgttacctcgcg
ttcgcggcgtcgccgcgcgcggcgtgggccggcaacttccgcgagctgtcggcctcggtc
acgcggatggcgacgctggccgatgcggggcggatcaccgaggatctggccgaacaggag
gtcgagcggctgacgcgcacgtggtcgccgccgggcggcgcgggggcgtccgatacgtgc
gtcgatgcggtgttcggcgcgcgtgcggcggaactcgacctgttcgaccgcgcgcagctc
gaacgcgtgctcgacgtgtgccgcgtgtcggcgagcctgtcggaagccgggcgcacgctg
ttcgcggtgtcgcggcagagcaagaagcagccgaacgatgcggaccggctgcgcaagtat
ctcgcgcggttcgggctggattgggacggggtgcggcaggcgctcgaactggcgcggtga
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