Burkholderia pyrrocinia: ABD05_20370
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Entry
ABD05_20370 CDS
T03962
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpyr03009
]
ABD05_20370
Enzymes [BR:
bpyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABD05_20370
Ribosome biogenesis [BR:
bpyr03009
]
Prokaryotic type
rRNA helicases
ABD05_20370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AKM02579
LinkDB
All DBs
Position
2:921948..923345
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AA seq
465 aa
AA seq
DB search
MTQPTAAPFSALPLTPATLANLAQLGYVDMTPIQAASLPIALAGQDLIAQAKTGSGKTAA
FSLALLSRLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIVKLSQQFLRNPKEVKLEERHDNSKIRQRFYEVTENERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGAI
EQAQKRDVEWHPLAELKPAGDDTLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVAHDALRKLNAGKIKGKRVKVRLMDEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaccgaccgcagcgcccttcagcgcgctgccgctgacgcccgccacgctcgcc
aacctcgcgcagctcggttatgtcgacatgacgccgatccaggccgcgagcctgccgatc
gcgctggccggccaggacctgatcgcgcaggcgaagacgggcagcggcaagaccgccgcg
ttctcgctcgcgctgctgtcgcgcctcgacgcgcgccgcttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgagctcgccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggaaaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcaggcg
cagagcctcgagcacggcgcgcatatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgatcgcggcaacctgaagctcgacgcgctgaacacgctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggatgtgcccgacg
acacgccagacgctgctgttctccgcgacctatccggacggcatcgtgaagctgagccag
cagttcctgcgcaatccgaaggaagtgaagctcgaagagcgccacgacaacagcaagatc
cgccagcgcttctatgaagtgaccgagaacgagcggctgcatgcggtcggccagttgctg
aaccactaccggcccgtcagcacgatcgcgttctgcaacacgaagcagcagtgccgcgac
ctgctcgacgtgctgcatgcgcagggcttccacgcgctcgcgctgcacggcgagctcgac
cagcgcgaacgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtg
gcgaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaagcggtgatcaacgtc
gacgtgacgcccgaccccgaagtgcacgtgcaccgcatcggccgcacgggccgcgcggat
caggacggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtcggcgcgatc
gaacaggcgcagaagcgcgacgtcgaatggcatccgctcgccgagctgaagccggccggc
gacgacacgctgctgccgccgatggaaacgctgcagatcctcggcggacgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgatgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgcg
cacgacgcgctgcgcaagctcaatgcggggaagatcaagggcaagcgggtcaaggtccgg
ctgatggacgaagagtga
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