Burkholderia pyrrocinia: ABD05_21880
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Entry
ABD05_21880 CDS
T03962
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00300
Lysine biosynthesis
bpyr00470
D-Amino acid metabolism
bpyr01100
Metabolic pathways
bpyr01110
Biosynthesis of secondary metabolites
bpyr01120
Microbial metabolism in diverse environments
bpyr01230
Biosynthesis of amino acids
Module
bpyr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABD05_21880
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABD05_21880
Enzymes [BR:
bpyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ABD05_21880
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
RGM_C
Motif
Other DBs
NCBI-ProteinID:
AKM02840
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All DBs
Position
2:complement(1256245..1257075)
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AA seq
276 aa
AA seq
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MPIGFQKMNANGDDFVIVDLRGQDQDGAPRLDRDLVRRMGDRHRGIGFNQLAVVSDCDDA
AARVAFWNADGSPLDTCGSATRGVAWQLMRETGMASLVLRTRRGYLVCSRETNGLITVEM
GTPLTGWRDVPVADALDTLALPLPGAPAACNMGNPHCTFFVDDLHTIDVAALGPAIEAHP
LFPQKTNVHFVQVIDRTHIRLRIWERGGGVPLGSGSCSCGAVVNGIRRGLLDDTVRVTCD
GGDVTVRWDGAGSVLLSGPVSFGFDGVWVDEEKPAI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcggatttcagaagatgaacgcaaacggcgatgacttcgtcatcgtcgacctg
cgcggtcaggatcaggatggcgcgccccgcctcgatcgcgacctcgtgcggcgcatgggc
gaccggcacagaggcatcggcttcaaccagcttgccgtcgtgtcggactgcgacgacgcg
gcggcccgcgtcgcgttctggaacgccgacggctcgccgctcgacacctgcggcagcgca
acgcgcggcgtcgcgtggcaactgatgcgggaaaccggcatggcgtcgctcgtgctgcgg
acccgccgcgggtatctcgtgtgttcgagggagacgaacggcctgatcaccgtcgagatg
ggcacgccgctcaccggctggcgggacgtgccggtcgccgacgcactcgacactctcgcg
ctgccgctgcccggcgcgccggccgcctgcaacatgggcaacccgcattgcacgttcttc
gtcgacgacctccacacgatcgacgtcgcggcactcggccccgccatcgaagcgcatccg
ctgtttccgcagaaaaccaacgtgcatttcgttcaggtcatcgatcgcacgcatattcgc
ctgcgcatctgggagcgcggcggcggcgtgccgctcggttcgggatcgtgttcgtgcggt
gcggtcgtcaacggcatccggcgcgggctgctcgacgatacggtgcgggtgacctgcgac
ggcggcgacgtcaccgttcgatgggacggcgccggcagcgtgctcctgagcgggccggtt
tcgttcggattcgacggggtgtgggtggacgaagagaagccggcgatctga
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