Burkholderia pyrrocinia: ABD05_25305
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Entry
ABD05_25305 CDS
T03962
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00300
Lysine biosynthesis
bpyr00470
D-Amino acid metabolism
bpyr01100
Metabolic pathways
bpyr01110
Biosynthesis of secondary metabolites
bpyr01120
Microbial metabolism in diverse environments
bpyr01230
Biosynthesis of amino acids
Module
bpyr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABD05_25305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABD05_25305
Enzymes [BR:
bpyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABD05_25305
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKM03445
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All DBs
Position
2:complement(2034387..2035625)
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AA seq
412 aa
AA seq
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MSLDSRQLATLAQQYGTPLWVYDADVIRDRIAQLRQFDVIRYAQKANSNIHILKLMREEG
ACVDAVSLGEIERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLAR
IGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIH
MHIGSGVDYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWD
AARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPS
MYGSYHAVSVHTHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDL
LFLHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIDELLALETFE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgattcccgccagctcgcgacgctcgcgcagcaatacggcaccccgctgtgg
gtgtacgacgccgacgtcatccgcgaccgcatcgcccaacttcgccagttcgacgtgatc
cgctacgcgcagaaggcgaattcgaacatccacatcctgaagctgatgcgcgaggaaggc
gcgtgcgtcgacgccgtgtcgctcggcgagatcgagcgcagcctcgcggccgggttcagt
ccggcaggcgaacccgaaggcgtcgtgttcacggccgacctgatcgaccgtccgacgctc
gcggccgtgctgaagcacggcgtgaccgtgaacgcgggttcgctcgacatgctcgcgcgc
atcggcgagcacgcaccgggccaccgcgtgtggctgcgcgtcaaccccggtttcgggcac
ggccacagcaacaagaccaacaccggcggcccgcagagcaagcacggcatctggatcgac
gacgtgccgcgcgcgatcgagatcgtgcgccagtacgggctgaagctcgtcggcatccat
atgcatatcggctcgggcgtcgactacggccacctgtcgcaggtgtgcgatgcgatggtc
gatctcgtcacgtcgctcggccatgacatcgacgcgatctcggccggcggcggcctgtcg
atcccgtatcgcgacggcgagccgcgcgtcgacgtcggccactacttcagccagtgggac
gccgcgcgcaagcggatcgaacggcatctcggccacccggtgcgcatcgagatcgaaccg
ggccgcttcctcgtcgccgaagccggcacgctcgtcactgaagtgcaggccgtcaaccgc
cggccgaagcatgatttcgtgctgatcgacgcgggcttcaacgacctgatgcgcccgtcg
atgtacggcagctaccacgcggtgtccgtgcacacgcacgacggcgcgctgcccgccggc
cggccgctcgtcgacctcgcgatcgcggggccgctgtgcgaatcgggcgacgtgttcacg
caggatgcgggcggcgtggtcacgcaccgcaagctcgcgcagccgcagatcggcgacctg
ctgttcctgcacgacgcgggcgcgtacggcgcgtcgatgtcctcgaactacaacagccgg
ccgctcgcgccggaagtgctcgtcgatcgcggcacgccgcggctgatccgccgccggcaa
accatcgacgaactgctcgcgctcgagacgttcgagtaa
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