KEGG   Burkholderia pyrrocinia: ABD05_26825
Entry
ABD05_26825       CDS       T03962                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpyr  Burkholderia pyrrocinia
Pathway
bpyr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bpyr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABD05_26825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpyr03021]
    ABD05_26825
Transcription machinery [BR:bpyr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ABD05_26825
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_23 HTH_11 HTH_24 PhyR_sigma-like HTH_3 Sigma70_ECF HTH_28 MerR HTH_Mga Phage_terminase HTH_29 HTH_AsnC-type HTH_VMAP-M9
Other DBs
NCBI-ProteinID: AKM04530
LinkDB
Position
2:2390545..2391096
AA seq 183 aa
MSTGPAAQPLDKLERSDDESARSRSVWLANEFRASYGWLKAKLLRRVGSPADAEDLASSS
FEALAGVDDPPGIREPRAWLTVIAQRLTFEMWRRRDLERAYHEALLNAEEPLAPSAESIV
EISQALFLIDQALDGLPPKARSAFIYSQIDGLTYSEIAARLGVSTSMVRKYIAQALTRCF
LIS
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcactggcccggcagcacagcctctcgacaaactggaaaggagcgacgacgagtcg
gctcgttcccgctcggtttggcttgccaacgagtttcgggccagctatggatggttgaag
gcgaagctgctgcggcgtgtcggatcgccggccgatgccgaggatctggcgtcgtcgtcg
ttcgaggcgcttgccggcgtcgatgacccgccgggtattcgcgagcctcgagcgtggctg
accgtcatcgcccagcgtctcaccttcgagatgtggcgccgccgggatctcgagcgcgcg
tatcatgaggcgctcctcaatgccgaggaacccctcgcgccgtccgccgaatcgatcgtc
gagatttcccaggcattgttcctgatcgatcaggcgctcgatggattgcctccgaaagcg
agaagtgcctttatctacagccagatcgacggcctcacttattccgagattgccgctcga
ctcggcgtctcgacaagcatggttcgcaaatacatcgcccaggcgcttacccgatgcttt
ctgatcagttga

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