Burkholderia pyrrocinia: ABD05_30460
Help
Entry
ABD05_30460 CDS
T03962
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00061
Fatty acid biosynthesis
bpyr00071
Fatty acid degradation
bpyr01100
Metabolic pathways
bpyr01212
Fatty acid metabolism
bpyr02024
Quorum sensing
bpyr04146
Peroxisome
Module
bpyr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABD05_30460
00071 Fatty acid degradation
ABD05_30460
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABD05_30460
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABD05_30460
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpyr01004
]
ABD05_30460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpyr04147
]
ABD05_30460
Enzymes [BR:
bpyr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABD05_30460
Lipid biosynthesis proteins [BR:
bpyr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABD05_30460
Exosome [BR:
bpyr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABD05_30460
Exosomal proteins of breast cancer cells
ABD05_30460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1646
AMP-binding_C_2
DUF493
Motif
Other DBs
NCBI-ProteinID:
AKM04611
LinkDB
All DBs
Position
3:29777..31237
Genome browser
AA seq
486 aa
AA seq
DB search
MRFSKLPDLRAASAPDAPCIADASTALSNREFHARVVEAAEVFANLGVGAGDVVAVMLPN
RVEFVVAMFAAWRLGAAVTPVKPSLTSKEATHQIVDSGAKLVIDVAGDEVVPGINSVAVA
ALRRVARDTREPFDNPAALALLIYTSGTTGLPKGVMLDHANVEAMSEMGLRSLDVTSADH
SMLVLPLFHVNGIMVSTLMPLLAGGRVMLRERFDIDTFFDDVERCRPTFFSGVPTIYALL
NALPDHVKPDTSSLRYGICGAAPAPADLLKSFETRYGFPLIEGYGLSEGTCGSTINPFDG
VRKAGTVGLPFAGQRIAIADPDGTHLPQGSTGEVLIQGPNIMRGYLGRPEETAKTIVDGW
LHTGDIGRIDEDGYLSIVGRLKEMIIRGGENIYPKEIEDALSEFPGVLEAAVIGAADETF
GEIVIAYVASRPGFTCVEAELREHCAVRLTRYKRPVAINVVDSLPKNAVGKIDKLKLRDM
WSTASR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttccaaacttcccgacctgcgcgcggcgtcggcgcccgacgcgccatgtatc
gcggatgcctctaccgccctgtccaacagggagtttcacgcccgggtcgtcgaggcggca
gaggtgttcgcgaatctgggcgtaggggcgggagacgtcgtcgcggtcatgctgccgaac
cgggtggagttcgtcgtggcgatgttcgccgcatggcgtctgggcgctgcagtcacgcct
gtcaagcccagtctgacgagcaaggaggccacccatcaaatcgtcgattccggcgcgaag
ctcgtcatcgacgtggccggtgacgaggtcgttcccggtattaattccgtggcggttgca
gcactgcggagggtagcgcgcgacacccgggagccgttcgacaatcctgcggcactggca
ttgctgatctacacgagcggcacgaccggcctacccaagggcgtgatgctggatcatgcc
aacgtcgaagccatgtcggaaatgggactgcgctcgctcgacgtcacgtcggcggaccac
agcatgctggttttgccgctgttccatgtcaacggcatcatggtcagtaccctcatgccg
cttctcgccggtggccgcgtcatgctgcgcgagcggtttgacatcgacacattctttgac
gatgtcgagcgatgtcgaccgacgttcttttccggcgtaccgacgatctacgcgctgctc
aacgcgctgccagaccatgtcaaacccgacacgtcgagcctgcggtacgggatctgcggc
gcggcacccgcgcctgcggatctactgaaaagcttcgagacccgctacgggtttccgttg
atcgaagggtacggactgtccgaaggcacctgtggctcgaccatcaacccgttcgacggc
gtgcgcaaggccggtacggttggcctgcctttcgccggtcaacggattgcgatcgccgat
ccggacggaacgcacttaccgcagggttcgactggcgaagtgctgatccagggccccaac
atcatgcgcggctatctcggcaggcccgaggaaacggcgaagaccattgttgacggctgg
ctgcacacgggtgacatcgggcgtattgacgaggacggttacctttccatcgtcggacgc
ttgaaagagatgatcattcgcggcggcgaaaacatctatccgaaggaaatcgaagacgcg
ttgtccgaattcccgggcgtgctcgaagcggcggtgatcggcgccgccgacgagacgttc
ggcgaaatcgtcattgcctacgtcgcatcccgcccgggattcacgtgcgtggaggccgaa
ctacgggaacactgcgcggtccgtttgacgcgctacaagcgacccgtggcgatcaacgtc
gtcgacagcctccccaagaacgcggtggggaagatcgacaagctgaagctgcgcgacatg
tggtcgaccgccagcagatga
DBGET
integrated database retrieval system