Burkholderia pyrrocinia: ABD05_33770
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Entry
ABD05_33770 CDS
T03962
Name
(GenBank) pyridoxal-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr00300
Lysine biosynthesis
bpyr00470
D-Amino acid metabolism
bpyr01100
Metabolic pathways
bpyr01110
Biosynthesis of secondary metabolites
bpyr01120
Microbial metabolism in diverse environments
bpyr01230
Biosynthesis of amino acids
Module
bpyr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABD05_33770
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABD05_33770
Enzymes [BR:
bpyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABD05_33770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_DAP_Arg_deC
Orn_Arg_deC_N
Motif
Other DBs
NCBI-ProteinID:
AKM05152
LinkDB
All DBs
Position
3:827719..828894
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AA seq
391 aa
AA seq
DB search
MTPERPLPPAGDHAWIADLRTPCYVYEPEVAIARYRSLKAQLGTKLIVSLKANPNQDMLA
RCAHAYEDGVELASRGELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVA
RFVPLAREAAAGGGTPGQVLLRLNAGALAGDDARALWHDHFGMTPSEAHDAVRTLAAAGF
PVAGLHVFSGPHSFIRQDATQPDTLALPELLAALARDLAPANGAPLGSLSLGGGFADDHP
GDAAFARYATALAPLAGDYSLAHEAGRAIFADAGVFATRVVAVKAWQDRTIAVCDGGLSH
AFLLAQTESVMRRLAAPSLVRRTPAPPSRGVPTSYVGSTCSRADVIGRDDTGAPPQVGDI
AVFARCGAYHRTYSMAHFLSHEAAHVYVRPA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgaacgcccgcttccgcccgccggcgatcacgcatggatcgccgacctgcgc
acgccgtgctacgtgtacgagccggaagtcgcgatcgcgcgctaccgatcgttgaaagcg
cagctcggtacgaagctgatcgtgtcgctgaaggcgaacccgaaccaggacatgctcgcg
cgctgcgcgcatgcgtacgaggacggcgtcgagctcgcgagccgtggcgaactcgacgcg
gtgatcggccggatcaagacgccgcgctacctgaacaatccgtcgatggacgagatgttc
atgcgtgcggggctcgcgtcgcgctgccatttcgtgctcgacaacccggacgcggtcgcg
cgcttcgtgccgctggcgcgcgaggcggcggccggcggcggcacgccgggccaggtactg
ctgcgcctgaacgccggcgcgctcgccggtgacgacgcgcgtgcgctgtggcacgaccac
ttcgggatgacgccgagcgaagcgcacgacgcggtgcgcacgctcgccgccgccggcttc
ccggtggccgggctgcatgtgttctccggcccgcattcgttcattcgccaggatgcgacg
caacccgacacgctcgccctgcccgaattgctcgcggcgcttgcacgcgatctcgcgccg
gccaacggcgcgccgctcggctcgctgagcctcggcggcggctttgccgacgatcatccg
ggcgatgccgctttcgcacgctatgcgaccgcgctcgcgccgctggccggcgactactcg
ctggcgcacgaagccggccgcgcaatcttcgccgacgcgggcgtgttcgcgacccgcgtc
gtcgcggtcaaggcgtggcaggaccgcacgattgccgtctgcgacggcggcctgtcgcat
gcgttcctgctcgcgcagaccgaatcggtgatgcgccgcctggccgcgccgtcgctcgtg
cgccgcacgcctgcgccgccatcgcgcggcgtaccgacgagctacgtcggcagcacctgc
agccgcgcggacgtgatcggccgcgacgacaccggcgcaccgccgcaggtcggcgacatc
gccgtgttcgcgcgctgcggcgcgtatcaccgcacgtactcgatggcgcatttcctgtca
cacgaagccgcgcacgtgtacgtgcggcctgcctga
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