KEGG   Burkholderia pseudomallei 1026b: BP1026B_I0005
Entry
BP1026B_I0005     CDS       T02049                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
bpz  Burkholderia pseudomallei 1026b
Brite
KEGG Orthology (KO) [BR:bpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpz03032]
    BP1026B_I0005 (hupA)
   03036 Chromosome and associated proteins [BR:bpz03036]
    BP1026B_I0005 (hupA)
   03400 DNA repair and recombination proteins [BR:bpz03400]
    BP1026B_I0005 (hupA)
DNA replication proteins [BR:bpz03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BP1026B_I0005 (hupA)
Chromosome and associated proteins [BR:bpz03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BP1026B_I0005 (hupA)
DNA repair and recombination proteins [BR:bpz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BP1026B_I0005 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF937 HU-CCDC81_euk_1 HU-CCDC81_euk_2 DUF2267
Other DBs
NCBI-ProteinID: AFI64682
UniProt: I1WEI8
LinkDB
Position
1:5488..5766
AA seq 92 aa
MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDSVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccgcccagacgggcgccagcaaggctcaa
accggcgaaacgctggacacgctcctcgaagtgatcaagaaggctgtgtcgaaaggcgac
tcagttcaactgatcggcttcggcagcttcggctcgggcaagcgcgcagcgcgcaccggc
cgcaaccccaagacgggcgagaccatcaagatcccggcagccaagacggtcaagttcacg
gctggcaaggcgttcaaggacgcagtgaacaagcgctga

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