Burkholderia pseudomallei 1026b: BP1026B_I1443
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Entry
BP1026B_I1443 CDS
T02049
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpz
Burkholderia pseudomallei 1026b
Brite
KEGG Orthology (KO) [BR:
bpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpz03009
]
BP1026B_I1443 (rumA)
Enzymes [BR:
bpz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BP1026B_I1443 (rumA)
Ribosome biogenesis [BR:
bpz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BP1026B_I1443 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_23
Cons_hypoth95
RrnaAD
Methyltrans_SAM
Methyltransf_11
Methyltransf_15
MTS
PCMT
TRAM
N6_N4_Mtase
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AFI66080
UniProt:
A0A0H3HMC4
LinkDB
All DBs
Position
1:1553126..1554523
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AA seq
465 aa
AA seq
DB search
MSEAVPLSTRRASSAGDAPGRAPVLDIDSLDMEARGVGRVVDENGEPGKVIFVEGALPGE
RVTYSSFRRKPTYEQAQVVDILRPSVMRTQPKCAFFGTCGGCSMQHLDMRAQVAIKQRVL
EDNLWHLAKLRAEAMFAPIHGPSWGYRYRARLTVRHVAKKGGVLVGFHEKKSSYVADMTS
CEVLPPHVSAMLVPLRRLVEQLSIRDRMPQIELAVGARVTALVLRVLEPINAADEALLRE
FADTHRVQFWLQPKGPDTVAPFYPLDAQLDYTLPEFGIRMPFKPTDFTQVNHQINRVLVG
RALRLLAPERGDRVLDLFCGIGNFTLPLARLAREVVGIEGSDALTARALENAKENGVDGH
TSFACRNLFEVTADDLRALGAFDKFLVDPPREGALAVSKALAEIAQSGAGPLPARIVYVS
CNPSTLARDAGLLVHEAGYRLKGAGVVNMFPHTSHVESIALFERD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaagccgtccccctctccacgcgccgcgcatcgtccgcgggcgacgcgcccggt
cgcgccccggttctcgatatcgattcgctcgacatggaggcgcgcggcgtcggccgcgtc
gtcgacgaaaacggcgagcccggcaaggtgattttcgtcgagggcgcgttgcccggcgag
cgcgtcacttattcgagctttcgccgcaagccgacctacgagcaggcgcaggtcgtcgat
attctgcgcccgagcgtgatgcgcacgcagccgaaatgcgcgtttttcggcacgtgcggc
ggctgctcgatgcagcatctcgacatgcgcgcgcaggtcgcgatcaagcagcgcgtgctc
gaggataacctctggcatctcgcgaagctgcgcgccgaggcgatgttcgcgccgattcac
gggccgtcgtggggctatcgctatcgtgcgcgcctcaccgtgcgccatgtcgcgaagaag
ggcggcgtgctcgtcggcttccacgagaaaaagagcagctacgtggccgacatgacgagc
tgcgaagtgctgccgccgcacgtgtcggcgatgctcgtgccgctgcgccggctggtcgag
caattatcgatccgcgatcgcatgccgcagatcgagctcgcggtcggcgcccgggtgacg
gcgctcgtgctgcgcgtgctcgagccgatcaacgcggccgacgaggcgctcctgcgcgaa
ttcgccgacacgcatcgcgtgcagttctggctgcagccgaaagggccggatacggtcgcg
ccgttctatccgcttgacgcgcagctcgattacacgctgccggaattcgggatccggatg
ccgttcaagccgaccgatttcacgcaggtcaatcaccagatcaaccgcgtgctcgtcggc
cgcgcgctgcggctactcgcgcccgaacgcggcgatcgcgtgctcgatctgttctgcggg
atcggcaacttcacgctgccgctcgcgcggctcgcacgcgaagtggtcggcatcgagggc
agcgacgcgctgactgcgcgcgcgctcgagaatgcgaaggaaaacggcgtcgacggccat
acgtcgttcgcgtgccgcaacctgttcgaggtgacggcggacgatctgcgcgcgctcggc
gcattcgacaagttcctggtcgatccgccgcgcgaaggcgcactcgcggtatcgaaggcg
ctcgccgagatcgcgcagagcggtgcggggccgttgcctgcgcggatcgtgtacgtgtcg
tgcaacccgtcgacgcttgcgcgagacgcggggctcctcgtgcacgaggcgggttatcgg
ctcaagggcgcgggcgtcgtcaacatgttcccgcatacctcgcatgtcgaatcgatcgcg
ctgttcgagcgcgattga
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