Burkholderia pseudomallei 1026b: BP1026B_I1850
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Entry
BP1026B_I1850 CDS
T02049
Name
(GenBank) Hfq protein
KO
K03666
host factor-I protein
Organism
bpz
Burkholderia pseudomallei 1026b
Pathway
bpz02024
Quorum sensing
bpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP1026B_I1850
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BP1026B_I1850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpz03019
]
BP1026B_I1850
03036 Chromosome and associated proteins [BR:
bpz03036
]
BP1026B_I1850
Messenger RNA biogenesis [BR:
bpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BP1026B_I1850
Chromosome and associated proteins [BR:
bpz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BP1026B_I1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Mucin-like
LSM
Hfq_1
SelB_WH1
Motif
Other DBs
NCBI-ProteinID:
AFI66470
UniProt:
A0A0H3HNI4
LinkDB
All DBs
Position
1:2053616..2054266
Genome browser
AA seq
216 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGNGPVIVTRRRRSLGPTDGQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggtgacggcggctacggttcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgcggcgacggcggctacggctcccgcgaaccgcgtggcgacggc
ggctatggcgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttacggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcaacggcccg
gtgatcgtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa
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