Burkholderia pseudomallei 1026b: BP1026B_I2262
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Entry
BP1026B_I2262 CDS
T02049
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpz
Burkholderia pseudomallei 1026b
Pathway
bpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BP1026B_I2262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpz03400
]
BP1026B_I2262
Enzymes [BR:
bpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BP1026B_I2262
DNA repair and recombination proteins [BR:
bpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BP1026B_I2262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
DEAD
MukB
RecD_N
CbiA
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AFI66869
UniProt:
A0A0H3HKM3
LinkDB
All DBs
Position
1:complement(2496898..2499588)
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AA seq
896 aa
AA seq
DB search
MVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASR
ATAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDGIVRGGECPLVVDRDGRLYLAR
YFEYETRLANALVERSRCGGAPACGADALSPDALGERLVRYFGPQKERGVDWQRVAALIA
LTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPELRIALAAPTGKAAQRMQEALHARAGSL
PAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDAL
APNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCATIARALGVGEAEFVAALPDGF
VVQAVGAERVADARAAAADMDVAARGTAGAAAAAARATAAAAARMTTAAAAARGGAPESA
AQRAPAPHAGRRGGGRASNRTVDDAQGSLFAFDDDAFGVGTSGGEPGAGAQGAGRRDGGA
PSLDEPHAGRRDGGASPGVAHSRRDAFDARARSGPADVSDLENAARAYAPAGAAGPADSP
ADASFVEPAAWIEADELAWLDNAVFSFSEGASANAEADGRRSAAATATDAGARTAPPVAR
EATAPTPRETARSDGSAVAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALS
TQDDAAARFSDDGGATLSAATVEQLARGFAGYAAALRDALATPEPDALPLFDVLNRFRVL
CATRTGARGAEEVNARMAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIA
LPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRV
LSRELVYTAITRARARVQVIGSRAVLALAIATRTARDSGLAARIADALRARQEGAR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacgaacgtttcgcgtggacgggcggcctggcggaccgtctgcccgagccggcc
gatttcgggctcgcgctcgccgaaggcttcgcgcgccggatcgggatgctgtcgcggcgt
gtcggcgcgagcgccgcggccgcgcgctgggcggcacgcgcggcgttcgccgcgagccgc
gcgacggcggcggggcacgtatgcgtcgcgctgcgcgcgctcgcgcagcgctacgacgag
ccgtacgacgacgtacgcgcggcgctcgccgcgagcggcgtgaccgcgttcgacggcatc
gtgcgcggcggcgagtgcccactcgtcgtcgatcgcgatggtcggctgtatctcgcgcgc
tacttcgaatacgagacgcggctcgcgaacgcgctcgtcgagcggagccgatgcggcggc
gcgccggcgtgcggcgccgatgcgctctcgcccgacgcgctcggcgagcggctcgtccgc
tatttcgggccgcagaaggagcggggcgtcgattggcagcgcgttgcggcgctcatcgcg
ctcacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacgacggtc
gtcggcgtgatcgcgtgcctgctcgatgcgcatccggagttgcggatcgcgcttgccgcg
cccaccggcaaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggcagcctg
ccggcggaactcgcggcgcgcctgccgcgcacgtcctgcacgctgcaccggctgctgggc
ggtggcccgggcgggcgcttcgcgcaccaccgcgacaatccgctgccgtacgatctcgtc
gtcgtcgacgaggcttcgatgatcgacgtcgcgctcgccgcgcatttgctcgacgcgctc
gcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtcgaggcg
ggcgcggtgttcgccgagctgagcgcgcgtcccgcgttcagcccggcgacgtgcgcgacg
atcgcgcgcgcgctcggcgtcggcgaggccgagttcgtggcggcgctgccggacgggttc
gtcgtgcaggcggtcggcgcggagcgcgtggcggacgcgcgtgcggcggcggccgatatg
gacgtggccgcgcgcgggacggccggcgccgcggctgcggccgcacgagcgaccgcggcc
gcagccgcacgaatgaccacggccgcagccgcggcgagggggggcgcgccggaatccgcc
gcgcaacgcgcgccggcgccgcacgcgggccggcgcggcggcgggcgcgcatcgaatcgg
accgtcgacgatgcgcagggatcgttgttcgcgttcgacgacgacgcattcggtgtgggc
acgtcgggcggcgagccgggggccggcgcgcaaggtgccgggaggcgagatggcggggcg
ccgagcctcgacgagccgcacgccgggcgccgggacggcggcgcatcgcccggcgtcgcg
cacagccggcgcgatgcgttcgacgcgcgtgcccggtcgggtccggcggatgtttccgac
ctggaaaacgccgcgcgcgcgtacgcgccggcgggcgcagccggcccggccgattcgccg
gcggacgcgtctttcgtcgagccggccgcgtggatcgaagcggacgaactcgcgtggctc
gacaacgcggtcttttcgttctccgaaggcgcttcggcgaatgccgaagccgacgggcgg
cgaagcgccgcggcgacggcgaccgacgcgggcgcgcgcaccgcgccgccggttgcgcgg
gaagcgacggcgccgacgccgcgcgagaccgcgcgatcggacggttccgccgtcgcgccg
ctgaccgactgcgtcgtctggcttgaacgcaactatcgcttcggccttgattcgccgatc
ggccggctgtcgcttgcgattcgccgcggcgcggtgcaggacgcgctcgacgcgctatcg
acgcaagacgacgcggccgcgcgttttagcgacgacggcggtgcgacgctatcggccgcg
acggtcgagcagctcgcgcgaggcttcgccggctatgcggccgcgctgcgcgacgcgctg
gcgacgcccgagcccgatgcgctgccgctcttcgacgtgctcaaccgctttcgcgtgctt
tgcgcgacgcgcacgggcgcgcgcggcgcggaggaagtcaacgcgcgcatggcggccgag
gtgcgccgcgcggtgcgcgtgccgctcgcgctcggtgcgcactggttcgccggacggccc
gtgatggtgacgcgcaacgattacgcgctcggcctcttcaacggcgacatcggcattgcg
ctgcccggcgcgcgcggtgcgctgcgcgtctggtttcgcggcgcggacggccgcgcccgg
gcggtgtcgcccgccgcgctgccgccgcacgacacggcgttcgcgctgaccgtccacaaa
tcgcagggctcggaattcgacgacgcggcactgatcctgcccgcgtcgttcaatcgcgtg
ctgtcgcgcgaactcgtctacaccgcgatcacgcgcgcgcgcgcgcgcgtgcaggtgatc
ggctcgcgcgcggtgctcgcgctcgcgatcgcgacgcgcacggcgcgcgattccggcctt
gccgcacgaatcgccgatgcgctgcgcgcgcggcaggagggcgcgcgatga
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