Burkholderia pseudomallei 1026b: BP1026B_I2348
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Entry
BP1026B_I2348 CDS
T02049
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bpz
Burkholderia pseudomallei 1026b
Pathway
bpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP1026B_I2348 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpz03019
]
BP1026B_I2348 (pnp)
03016 Transfer RNA biogenesis [BR:
bpz03016
]
BP1026B_I2348 (pnp)
Enzymes [BR:
bpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BP1026B_I2348 (pnp)
Messenger RNA biogenesis [BR:
bpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BP1026B_I2348 (pnp)
Transfer RNA biogenesis [BR:
bpz03016
]
Prokaryotic type
tRNA degradation factors
BP1026B_I2348 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
OB_PDCD11
KH_2
Methyltransf_FA
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
UPF0181
S1_TP0910
Motif
Other DBs
NCBI-ProteinID:
AFI66949
UniProt:
A0A0H3HKU4
LinkDB
All DBs
Position
1:complement(2599815..2601956)
Genome browser
AA seq
713 aa
AA seq
DB search
MSLFNKIVKEFQWGQHKVRLETGEIARQASGAVIVDIEDTVVLATVVGAKSAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYVNNEYVLNPTREQIKASRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWDWQPAPK
DEALNARVTELAQPELLAAYQIRDKQARSTKLKEVYAATSAKLEEEAVAAGTVAADKATV
GNILFDLEAKIVRGQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMKDAVAGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSEGMAEAKKRIENITAEIEVGHVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAQADTPPQQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttcaataaaatcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaaatcgcgcgccaggcaagcggcgccgtgatcgtcgacatcgaggacacc
gtcgtgctcgcgaccgtcgtcggcgcgaagtcggcgaagccgggccaggatttcttcccg
ctcaccgtcgactacatcgagaagacctactcggccggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcacgaaacgctgacgtcgcgcctcatcgaccgcccg
ctgcgcccgctcttccccgaaggcttctataacgaagtgcaggtcgtgatccacgtgctg
tccgtgaacccggagattccggcggacatcccggcactcatcggcgcatcggctgcgctc
gccgtgtccggtctgccgttcaacggcccggtcggcgccgcgcgcgtcgcgtacgtgaac
aacgaatatgtgctgaatccgacgcgtgagcagatcaaggcgtcgcgcctcgatctcgtc
gtcgcgggcacggagcgtgcggtgctgatggtcgagtcggaagccgaccaactgccggag
gacgtgatgctcggcgcggtggtgttcggccacgagcagatgcagacggcgatcgacgcg
atccacgagctcgtgcgcgaaggcggcaagcccgagtgggactggcagccggcgccgaag
gacgaggcgctgaacgcgcgcgtgaccgaactcgcgcagccggagttgctcgccgcctac
cagatccgcgacaagcaggcgcgctcgacgaagctgaaggaagtgtacgcggcgacgtcg
gcgaagctggaggaagaagcggtggcggccggcacggtcgcggcggacaaggcgaccgtc
ggcaacatcctgttcgacctcgaggcgaagatcgttcgcggccagatcctgaacggcgag
ccgcgcatcgacggccgcgacacgcgcacggtgcgcccgatcgaaatccgcacgggcgtg
ctgccgcgcacccacggctcggcgctgttcacgcgcggcgagacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggtgacgaacagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgcgtc
ggctcgccgaagcgccgtgagatcggccacggccggctcgcgaagcgcgcgctcgtcgcg
tgcctgccgagcgccgacgaattcggctactcgattcgcgtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcgtcggtgtgcggcggctgtctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggcatcgcgatgggcctgatcctcgagggcaac
aagttcgcggtgctgaccgatatcctcggcgacgaggaccacctcggcgacatggacttc
aaggtggccggcacggcggacggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
ctcggcaagatgaaggacgcggtcgcgggcgcgaacacgcaactgtccgaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagattcgcgacgtgatcggcaagggcggc
tcggtgatccgcgcgctgaccgaagaaaccggcacgacgatcgacatctcggatgacggc
gtcgtgacgatcgcgagcacgaacagcgaagggatggccgaggcgaagaagcgcatcgag
aacatcacggccgagatcgaagtcggccacgtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggccagcaggtgaag
gtcaaggtgatccagacggacgagaaggggcgcgtgcgtctgtcggcgaaggcgctgctg
aacgaggcggccgcccaggcggatacgccgccgcagcagtaa
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