Burkholderia pseudomallei 1026b: BP1026B_I3449
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Entry
BP1026B_I3449 CDS
T02049
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bpz
Burkholderia pseudomallei 1026b
Pathway
bpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BP1026B_I3449 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpz03019
]
BP1026B_I3449 (recQ)
03400 DNA repair and recombination proteins [BR:
bpz03400
]
BP1026B_I3449 (recQ)
Enzymes [BR:
bpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BP1026B_I3449 (recQ)
Messenger RNA biogenesis [BR:
bpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BP1026B_I3449 (recQ)
DNA repair and recombination proteins [BR:
bpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BP1026B_I3449 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFI68028
UniProt:
A0A0H3HUR0
LinkDB
All DBs
Position
1:complement(3815108..3816955)
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AA seq
615 aa
AA seq
DB search
MSRSLEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSEAGR
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEIRQKHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGASHLIEVLRGARTEKVQQRGHDSLSTFGIGAELSEAEWRAIFRQ
LVAFGYLAVDHGGFGALVLTEASKPVLKGEEKVTLRRYVKPARTRQSSGRSGARVDPTAG
MSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARK
LDRFGDEILEVVESV
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctcgaaattctcaacgaagtcttcggctatcccgccttccgaggtcaa
cagggcgagatcgtcgagcacgttgcggcgggcggcgactgtctcgtgctgatgcccacg
ggcggcggcaagtcgctctgctaccagattccggcgctcgtgcgcagcgaagcgggccgc
ggcgcgggcatcgtcgtgtcgccgctcatcgcgctgatgcaggatcaggtcgccgcattg
tccgaggtcggcgtgcgcgccgcgtatctgaactcgacgctgtcgggggccgaggcggcc
gcgaccgaacgcgcgctgcgcgacggcgacatcgatctgctctacgtcgcgcccgagcgg
ctgatgacgccgcgcttcctcgatctgctcgagcgcgcgcgcatcgggcttttcgcgatc
gacgaggcgcactgcgtatcgcagtgggggcacgatttccggcccgagtacattcagttg
tcggtgctgcacgagcgctttccggacgtgccgcggatcgcgctgaccgcgaccgccgat
gcgatcacccgcgacgagatcgtgcagcgtctggcgctcgacgacgcgcgaatcttcgtg
tcgagcttcgaccggccgaacatccgctaccggatcgtcgaaaaggacaacgcgcgctcg
cagttgctcgacttcattcgcgccgagcatacgaacgccgacggtacgaccgacgccggc
gtcgtgtactgcctgtcgcgccgcaaggtcgaggagacggccgaatggctgaaggcgcaa
ggggttcgtgcgctgccgtatcacgcgggaatggagttcgagatccggcagaagcaccag
gagatgttccagcgcgaggaaggggtcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcacacctggatctgccgaagagcgtcgaaggc
tattaccaggagaccggacgcgcggggcgcgacggcctgccggcgaacgcgtggatggcg
tacgggctcggcgacgtcgttcagcagcgcaagatgatcgacgaatcggaagccgacgac
acgcacaagcgtgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggca
tcgtgccgccgcgtgcggctcctcgcgtatttcggcgagacgagcggcccgtgcggcaac
tgcgacacctgcctcgagccgccggcgacatgggacgcgacgcgcgaagcgcagatggcg
ctgtcgtgcgtattccgcgcgcagcgcgcaagcggcttcaatttcggcgcgagccatctg
atcgaagtgctgcgcggtgcgcggaccgagaaggtccagcaacgcggccacgacagtctc
agcacgttcggcatcggcgccgagttgtccgaagccgaatggcgcgcgatcttccggcag
ctcgtcgcgttcggctatctcgccgtcgaccacggcggcttcggcgcgctcgtgctgacg
gaggcgagcaagccggtgctcaagggcgaggagaaggtcacgctgcgccgctacgtgaag
ccggcgcgcacacggcagtcctccggccgcagcggcgcgcgcgtcgatccgacggccggc
atgagcgcgcgcgagcgcgcgtgctgggagcgcctgcgcgcgtggcgcgcggaaacggcg
aagagcgacggcgtgcctgcgtacgtgatcttccacgacgcgacgctcgcggagatcgcg
cgcaacgcgcccgaatcgatcgacgatctgcgccatatccccggaatcggcgcgcgtaag
ctcgatcgcttcggcgacgagattctcgaggtcgtcgagtcggtctga
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