KEGG   Burkholderia pseudomallei 1026b: BP1026B_II1374
Entry
BP1026B_II1374    CDS       T02049                                 
Name
(GenBank) DEAD-box ATP dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpz  Burkholderia pseudomallei 1026b
Brite
KEGG Orthology (KO) [BR:bpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpz03400]
    BP1026B_II1374
Enzymes [BR:bpz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BP1026B_II1374
    5.6.2.6  RNA 3'-5' helicase
     BP1026B_II1374
DNA repair and recombination proteins [BR:bpz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BP1026B_II1374
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII DprA_WH HTH_IclR MarR_2
Other DBs
NCBI-ProteinID: AFI69618
UniProt: A0A0H3HUY4
LinkDB
Position
2:1735972..1740603
AA seq 1543 aa
MHATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLEPVMANDVWERLYDRIAELAAAHRTTLVFVNTRRMAERAA
RHLADRLGADAIAAHHGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQL
GSPRGIAPFLQRVGRSGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDALL
AHGDAAGAGAALPVNAASAAAPSTAIPSAAAPTVAAMPVPPEAELRTEPRRLAPALAWLT
GELGLDAEAARQIADYLARARAALGALPTQDTLVMERFFDESGGMQLVIHSPYGSRINRA
WGLALRKRFCRSFNFELQAAATDDALILSLSHAHSFALDEVWRYLRASSAEHVLIQALLD
APLFAARWRWNATTSLALPRFAGGRKVAPQLQRMKSEDLLATVFPDQVACAENIVGEREV
PKHPLVDQTLDDCLHDAMDTEGWLALLRRIEAGDVALVARDLPAPSPLAAEILNAKPYAF
LDDAPLEERRTQAVLARRWSDPESADDLGALDAGAIEAVRDEAWPLVREPDEMHDALVGL
ACIADDEIASHDGWRACVAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDP
PLAPPPGFDAPWEPEAALVDVIRARLTGFGPLTAAALAAPLALPAASVAIALAALEREGY
VMRGRFTPGARDDEWCERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRG
LGGDALAAVVHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKA
ASAPVKTTPVVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHAR
LLPVELERALGELVAAGLVNADSFAGLRALLRPAAQRPSRARRGGALIGGMDDAGRWALV
QRLPLAPLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEADARIARAMR
AAPPQAGRHAIAPAALEHVARTLLRRYGVAFWRLLACEAEWMPSWRELLPVYRRLEARGE
IRGGRFVAGLAGEQFALPDAIPILRELRRRPAEGLMLCVSGADPLNLTGTLLPGERVPAL
AGNRILFRDGVPIASLVGGQFAFARELDALAQDRARARLARQR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgcacgccactcccgcccgccctgccgccggcgcgctcgacgcgttccaccccgtcgtc
gccgcctggttctccgacacgttcgccgcgcccaccggcgcgcaagcgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaagacgctc
accgcattcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcatgatggcgcg
ctacccgacgagacgctcgtcgtctacgtgtcgccgctgaaagcgctgtcgaacgacatt
cacgtgaacctcgaagcgccgctcgccggcatcgccgccgaaatcgcgcggcgcgggctg
ccggtgccgcaaatccgcaccgccgtgcgcaccggcgacacgacccaggccgagcgcgtc
gcgcatcgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcgcatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgaacgccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggctgtccgcgacgcaaaagccggtc
gaggcggtcgcgcgctttctcgtcggcggccgcgacgacgcaccgctcgattgcgcgatc
gtcgacaccggccacacgcgcacgcgcgatctcgcgctggaattgccgcccgtgccgctc
gagcccgtgatggcgaacgacgtgtgggagcgcctctacgatcgcatcgcggagctggcc
gccgcgcaccgcacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcc
cgccatctggcggacaggctcggcgcggacgcgatcgccgcgcaccacggcagcctcgcg
aaggaacatcgcttcgacgccgagcagcgcctgaagcacggcaaactcaagctgctcgtc
gccacggcctcgctcgagctcggcatcgacatcggcgacgtcgagctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcgggcgctccgggcaccatatc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgaactcgtcgaatgcgcg
gcgctcctcgattgcgtgcggcgcggcgagctcgacgtgctgcgcattccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgaggtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcaccgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcgcggctcgcg
gccgtcacctcgggcggcacgattcccgataacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggatttcgcggtcgaaagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgacgagctgtcggcgggcgtcgcgcggctgcgcgcgcggctcgacgcgctgctc
gcgcacggcgatgcggccggcgcgggtgcggccttgccggtgaacgccgcatccgccgcc
gccccgtctaccgccatcccgtccgccgccgcgccgaccgtcgccgcgatgccggtcccc
cccgaggcggaactccgcaccgagccgcgtcgcctcgcgcccgcgctcgcgtggctcacg
ggcgagctcggcctcgatgccgaagccgcgcggcagatcgccgattacctcgcgcgcgcc
cgcgcggcgctcggcgcgctgccgacgcaggacacgctcgtgatggagcgcttcttcgac
gaatcgggcggcatgcagctcgtgatccattcgccgtatggctcccggatcaaccgcgcg
tggggcctcgcgctgcgcaagcgcttctgccgcagcttcaacttcgagctgcaggcggcc
gcgaccgacgacgcgctgatcctgtcgctgtcgcacgcgcacagcttcgcgctcgacgag
gtgtggcgctacctgcgcgcgtcgagcgccgagcacgtgctgatccaggcgctgctcgac
gcgccgctgttcgccgcgcgctggcgctggaacgcgacgacgtcgctcgcgttgccgcgc
ttcgccggcggccgcaaggtcgcgccgcaactgcagcggatgaagagcgaggatctgctc
gcgacggtgttccccgatcaggtcgcgtgcgcggagaacatcgtcggcgagcgcgaggtg
ccgaagcacccgctcgtcgaccagacgctcgacgactgcctgcacgacgcgatggacacc
gagggctggctcgcgctgctgcggcggatcgaggcgggcgacgtcgcgctcgtcgcgcgc
gatctgcccgcgccttcgccgctcgccgccgagatcctgaacgcgaagccgtacgcgttc
ctcgacgatgcgccgctcgaggagcgccgcacgcaggcggtgctcgcgcggcgctggagc
gacccggaatcggccgacgatctcggcgcgctcgacgcgggcgcgatcgaagcggtgcgc
gacgaggcgtggccgctcgtgcgcgagcccgacgagatgcacgacgcgctcgtcgggctc
gcgtgcatcgccgacgacgaaatcgcgtcgcacgacggctggcgcgcgtgcgtcgcgcag
ctcgcggcgggcgggcgcgcggcgcggctcgcgctcgcgggcggccgcgggctgtggatc
gcagccgagcgcgtcgcgtgcatgcgcgcgctgtacggcgcggacgtcgcgctcgacccg
ccgctcgccccgccgcccggcttcgatgcgccgtgggagcccgaggccgcgctcgtcgac
gtgatccgcgcgcgcctcacgggtttcgggccgctcacggccgccgcgctcgccgcgccg
ctcgcgctgcccgccgcgtcggtcgcgatcgcgctcgccgcgctcgagcgcgagggctac
gtgatgcgcgggcgcttcacgccgggcgcgcgcgacgacgaatggtgcgagcggcacctg
ctcgcgcgcatccatcgctatacggtcaagcgcctgcggcgcgagatcgagcccgtcgag
ctcgcggatttcatgcgcttcctgtttcattggcagcgcgtcgcgcccgacacgcgcggc
ctgggcggcgacgcgctcgcggcggtcgtccaccagctcgaaggtttcgaggcggccgcg
agcgcgtgggaggacgaaatcctgcccgcgcggctcgccgattacgtggcgggcggcctc
gacgagccgtgccgcgccggcaagctgacgtggacgcggctcggcgcgccggcgaaggcc
gcgagcgcgccggtgaagacgacgcccgtcgtgctgttgccgcgccgcgagctcgcgatc
tggcaggcgctgcgcgatccggccgcgcagccggcgctgtcggcgcgcgccgaacgcgtg
cgcgcgacgctcgccgcgtacggcgcgatgttcttcgacgaactggccgcgcacgcgcgg
ctgctgcccgtcgagctcgaacgcgcgctcggcgagctcgtcgccgcgggcctcgtcaac
gcggacagcttcgcgggcctgcgcgcgctgctgcggccggccgcgcagcggccgtcgcgc
gcacggcgcggcggcgcgctgatcggcgggatggacgacgcggggcgctgggcgctcgta
cagcggctgccgctcgcgccgctcgattttggcgagggcggcagcgaagacgaagccgca
aatgatgacgatgccccgtccggcgacggcacgcccggcgccggccccgaagccgcgcgc
cgcggcggcgtgcgcgaaggcggcgccgaagccgatgcccgcatcgcgcgcgcgatgcgg
gccgcgccgccgcaagcgggccgccatgcgatcgcgcccgccgcgctcgagcacgtcgcg
cgcacgctgctgcgccgctacggcgtcgcgttctggcgcctcctcgcatgcgaggccgaa
tggatgccgagctggcgcgagctgctgcccgtctatcggcggctcgaggcgcgcggcgaa
atccgcggcggccgcttcgtcgcgggcctcgcgggcgaacagttcgcgctgcccgacgcg
atcccgatcctgcgcgagctccgccgccggccggccgaagggctgatgctgtgcgtgagc
ggcgccgatccgctcaatctgacgggcacgctgctgcccggcgaacgcgtgcccgcgctc
gcgggcaaccggatcctgttccgcgacggcgtgccgatcgcctcgctcgtcggcgggcag
ttcgcgttcgcgcgcgaactcgacgcgctcgcgcaggaccgcgcgcgggcgcgactcgcg
cggcagcggtaa

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