KEGG   Bradyrhizobium quebecense: J4P68_0000540
Entry
J4P68_0000540     CDS       T07890                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bqb  Bradyrhizobium quebecense
Pathway
bqb00010  Glycolysis / Gluconeogenesis
bqb00020  Citrate cycle (TCA cycle)
bqb00260  Glycine, serine and threonine metabolism
bqb00280  Valine, leucine and isoleucine degradation
bqb00310  Lysine degradation
bqb00380  Tryptophan metabolism
bqb00620  Pyruvate metabolism
bqb00630  Glyoxylate and dicarboxylate metabolism
bqb00640  Propanoate metabolism
bqb00670  One carbon pool by folate
bqb00785  Lipoic acid metabolism
bqb01100  Metabolic pathways
bqb01110  Biosynthesis of secondary metabolites
bqb01120  Microbial metabolism in diverse environments
bqb01200  Carbon metabolism
bqb01210  2-Oxocarboxylic acid metabolism
bqb01240  Biosynthesis of cofactors
Module
bqb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bqb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bqb_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bqb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bqb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bqb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    J4P68_0000540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    J4P68_0000540 (lpdA)
   00620 Pyruvate metabolism
    J4P68_0000540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    J4P68_0000540 (lpdA)
   00640 Propanoate metabolism
    J4P68_0000540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    J4P68_0000540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    J4P68_0000540 (lpdA)
   00310 Lysine degradation
    J4P68_0000540 (lpdA)
   00380 Tryptophan metabolism
    J4P68_0000540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    J4P68_0000540 (lpdA)
   00670 One carbon pool by folate
    J4P68_0000540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bqb04147]
    J4P68_0000540 (lpdA)
Enzymes [BR:bqb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     J4P68_0000540 (lpdA)
Exosome [BR:bqb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   J4P68_0000540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 DAO FAD_oxidored FAD_binding_3 HI0933_like GIDA Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N 2-Hacid_dh_C Thi4 NAD_binding_7
Other DBs
NCBI-ProteinID: UGY03306
LinkDB
Position
complement(78984..80405)
AA seq 473 aa
MADTSFDVIIIGSGPGGYVTAIRAAQLGFKTAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSADNVSFDPKAVVQRSRGVSKRLNDGVGFLMKKNKVTVIWGDATIDAP
GKITVKKSAVEAPKGASGEGTYQAKHIIVATGARPRVLPGLEPDKKLIWTYFEAMVPERM
PKSLLVVGSGAIGIEFASFFHTMGSDVTVVEVLPQILPVEDAEIAGLARKRFEKMGIKIM
SSTKVTKLEKKADSVVATIDDGKGQPQAKEFERVISAVGVVGNIENLGLEKLGVKTDRGC
IVIDGLGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICIEAIKGLHPHPMDKLLIPGCTYC
NPQVASVGLTEAKAKEDGREVRVGRFPFVGNGKAIALGEDQGLVKVVFDKKTDQLLGAHM
IGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGRVLNI
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggccgatacatcctttgacgtcatcatcatcggctccggccccggcggctacgtgacc
gcgatccgcgccgcgcagctcggcttcaagaccgcgatcgtggagaaatcctatctcggc
ggcatctgcctgaactggggctgcatcccgaccaaagcgctgctgcgctccgccgagatc
tatcactacatgcagcacgccaaggattacgggttgtcggccgacaacgtctcgttcgat
ccgaaggcggtggtgcagcgctcgcgcggggtctcgaagcgcctcaacgacggcgtcggc
ttcctgatgaagaagaacaaggtcacggtgatctggggcgatgccacgatcgatgcgccc
ggcaagatcacggtgaagaagtcggcggtcgaggcgccgaagggcgccagcggcgagggc
acctaccaagccaagcacatcatcgtcgcgaccggcgcgcggccgcgcgtgctgcccggg
ctcgagcccgacaagaagctgatctggacctatttcgaggcgatggtgccggagcggatg
ccgaaatcgctgctggtggtcggctccggcgcgatcggcatcgagttcgcctcgttcttc
cacaccatgggctctgacgtcaccgtggtcgaggtgctgccgcagatcctgcccgtcgag
gacgccgagatcgcggggctggcgcgcaagcggttcgagaagatgggcatcaagatcatg
tcctcgaccaaggtcacgaagcttgagaagaaggccgacagcgtggtcgcgaccatcgac
gacggcaagggccagccgcaggccaaggagttcgagcgcgtgatctcggcggtcggcgtg
gtcggaaacatcgagaatctcgggctggagaagctcggcgtcaaaaccgaccgcggctgc
atcgtgatcgacggtctcggcaagaccaacgtccccggcatctacgcgatcggcgacgtc
gcgggaccgccgatgcttgcgcacaaggccgagcatgagggcgtgatctgcatcgaggcg
atcaagggcctgcatccgcacccgatggacaagctgctgatcccgggctgcacctactgc
aacccgcaggtcgcctccgtcggcctcaccgaagccaaggccaaggaagacggccgcgag
gtccgcgtcggccgcttcccgttcgtcggtaacggcaaggcgatcgcgctcggcgaggac
cagggcctcgtcaaggtggtgttcgacaagaagaccgaccagctgctcggcgcgcacatg
atcggcgccgaggtcaccgagctgatccagggctatgtcgtagcgatgaatctggagacc
acggaggaggaattgatgcacaccgtgttcccgcatccgactttgtcggaaatgatgaag
gaagcggtactcgacgcctacgggcgcgtgctgaatatctga

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