Bradyrhizobium quebecense: J4P68_0003050
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Entry
J4P68_0003050 CDS
T07890
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4P68_0003050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqb03021
]
J4P68_0003050
03400 DNA repair and recombination proteins [BR:
bqb03400
]
J4P68_0003050
Enzymes [BR:
bqb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4P68_0003050
Transcription machinery [BR:
bqb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4P68_0003050
DNA repair and recombination proteins [BR:
bqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4P68_0003050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
UGY03767
LinkDB
All DBs
Position
complement(589531..590562)
Genome browser
AA seq
343 aa
AA seq
DB search
MGEQVTIQKNWQELIRPNKLQVTPGSDASRFATVVAEPLERGFGQTLGNALRRILLSSLQ
GAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGAVTA
GDIQTVGDVTVLNPDLQLCTLDDGAEIRMEFTVATGKGYVAAERNRPEDAPIGLIPVDSL
FSPVRKVSYKVENTREGQILDYDKLTMTIETNGAITPEDAVAYAARILQDQLNVFVNFEE
PRKEVTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPN
FGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacaagtgacgatccagaaaaattggcaagaactcattcgaccgaacaagctg
caggtgacgccgggctcggacgcgagccggttcgccaccgtggtcgccgagccgctcgag
cgcggcttcggccagacgctcggcaacgcgctgcgccgcatcctgctgtcctcgctgcag
ggcgcggcggtgcagtcggtgcatatcgacggcgtgctgcacgagttctcctcgatcgcc
ggtgtccgtgaagacgtcaccgacatcgtcctcaatatcaaggacatctcgatcaagatg
cagggcgaaggcccgaagcgcatggtcgtgaagaagcagggcccgggcgccgtcaccgcc
ggcgacatccagaccgtcggcgatgtcaccgtgctcaatcccgacctgcagctctgcacg
ctggacgatggcgccgagatccgtatggagttcacggtcgcgaccggcaagggctatgtc
gccgctgagcgcaatcgtcccgaggatgcgccgatcggcctgatcccggtcgacagcctg
ttctcgccggtccgcaaggtttcctacaaggtcgagaacacccgtgagggccagatcctc
gactacgacaagctgaccatgacgatcgagaccaacggcgcgatcacgccggaggacgcg
gtggcctacgctgcgcgcatcctgcaggatcagctcaacgtgttcgtcaacttcgaagag
ccgcgcaaggaagtcacgcaggagatcatccccgatctcgcgttcaacccggcgttcctc
aagaaggtcgacgagctcgagctgtcggtgcgttcggccaactgcctgaagaacgacaac
atcgtctacatcggcgacctcgtgcagaagtcggaagcggaaatgctccgcaccccgaac
ttcggccgcaagtcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctc
ggcatggaagtgccgggctggccgccggagaacatcgacgagctcgccaagcgctttgag
gatcactactga
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