Bradyrhizobium quebecense: J4P68_0009025
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Entry
J4P68_0009025 CDS
T07890
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4P68_0009025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqb03400
]
J4P68_0009025
Enzymes [BR:
bqb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
J4P68_0009025
DNA repair and recombination proteins [BR:
bqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4P68_0009025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UGY04858
LinkDB
All DBs
Position
1813793..1814308
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AA seq
171 aa
AA seq
DB search
MPDSDSHRLPDQLRANLRLVFVGTAASTRSAAVGHYYAHPGNRFWRALHEAGITPRRYRP
DEFAALLSLGIGFTDLSKTGAGMDHEIARQSFDVVGFRAKIETYRPRTIAFTSRKAASLF
YNRPTSALALGRQPSTSGFPNVFVLPSPSGAASGHWSLQPWRELAEWIMKT
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacagcgacagccaccgcctccccgatcagcttcgcgccaatctgcgcctggtg
ttcgtcggcactgcggccagcacgcgttcggccgcggtcgggcattactatgcacatccc
ggcaaccgcttctggcgcgcgctgcacgaggccggtatcacgccgcggcgctatcggccg
gacgagttcgcagcgctgctatcgctcggcatcggcttcaccgatctctccaagaccggc
gccggaatggatcatgagattgcgcgacagtcgttcgatgttgtgggcttcagagcgaag
atcgagacctatcgcccgaggaccatcgcgttcaccagcaggaaggcggcgagcctgttt
tacaacaggccgaccagcgcgcttgcgctggggcggcagccatcaacgagcggtttccct
aacgtattcgtgctgccgtcgccgtcaggcgcggcgtccgggcattggagtttgcagccg
tggcgcgagctcgccgagtggatcatgaaaacgtag
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