Bradyrhizobium quebecense: J4P68_0011465
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Entry
J4P68_0011465 CDS
T07890
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4P68_0011465 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqb03021
]
J4P68_0011465 (rpoD)
Transcription machinery [BR:
bqb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4P68_0011465 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UGY05309
LinkDB
All DBs
Position
complement(2342983..2345115)
Genome browser
AA seq
710 aa
AA seq
DB search
MATKAKTLQVKDKEKDDKAADAPEKDAADAPSPLLDLSDAAVKKMIKQAKKRGFVTFDQL
NEVLPSDTTSPEQIEDIMSMLSDMGINVTEADDSEGEDEKDDGDDETDNELVEVTQKAVT
EVKKSEPGERTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKIFLRDIIDLEATYAGPESKGGINPNLIGNNGAEGAAAEGNGGDVQAGA
PAHVAPPAAPPAPTPFRAAPAGGEAGVEEKDPAEAAAESDMDDDEFENQMSLAAIEAELK
PKVVETFDKIASEYKKLRRLQEQDIANQLQSESLSPSQERKYKKLKDEIIVEVKSLRLNQ
ARIDSLVEQLYDINKKLVSFEGRLLRLGDSHGVAREDFLRNYQGSELDPRWLNRVSKLSA
KGWKNFVHHEKDRIKDLRHEIQSLAALTGLEIGEFRKIVHGVQKGEREARQAKKEMVEAN
LRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI
ADQARTIRIPVHMIETINKIVRTSRQMLNEIGREPTPEELAEKLGMPLEKVRKVLKIAKE
PLSLETPVGDEEDSHLGDFIEDKNAILPIDAAIQSNLRETTTRVLASLTPREERVLRMRF
GIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaggcaaagacgctgcaggttaaggacaaggaaaaagacgacaaggcagcg
gatgctcctgagaaggatgccgctgacgcgccgtcgccgttgctcgacctgtcggatgcc
gcggtgaagaagatgatcaagcaggccaagaagcgcggcttcgtgaccttcgatcagctc
aacgaagtgctgccctccgacacgacctcgcccgaacagatcgaagacatcatgtcgatg
ctctcggacatgggcatcaacgtcaccgaggcggatgacagcgaaggcgaggacgagaag
gacgacggcgacgacgagaccgacaacgagctcgtcgaggtcacgcagaaggccgtcacc
gaggtcaagaagtcggagccgggcgagcgcaccgacgatccggtgcgcatgtatctgcgc
gagatgggcacggtggaattgctctcccgcgagggcgaaatcgccattgcaaaacgcatc
gaggccggccgcgaggcgatgatcgcgggcctctgcgaaagcccgctgaccttccaggcc
atcattatctggcgcgacgagctcaacgaaggaaagatcttccttcgcgacatcatcgat
ctcgaagccacctatgccggccccgagtcgaagggcggcatcaatccgaacctgatcggc
aacaacggcgccgagggcgccgccgccgaaggcaatggcggcgatgtgcaggccggcgcg
ccggcccatgtcgcgccgcccgcagcgccgccggcgccgaccccgttccgcgccgcgccc
gccggtggcgaagccggcgttgaggagaaggatccggccgaagccgccgccgagtccgac
atggacgacgacgagttcgagaaccagatgtcgctcgccgccatcgaggccgagctgaag
ccgaaggtggtcgagactttcgacaagatcgcgtccgaatacaagaagctgcgccgcctg
caggagcaggacatcgccaaccagctgcagagcgagtcgctgtcgccctcgcaggagcgc
aagtacaagaagctgaaggacgagatcatcgtcgaggtgaagtcgctgcgcctcaaccag
gcccgcatcgattcacttgtcgagcagctctacgacatcaacaagaagctggtctcgttc
gagggccgcctgctgcgcctcggcgacagccacggcgtcgcgcgcgaggacttcctgcgc
aactaccagggctcggagctcgacccccgctggctcaaccgtgtctccaagctgtcggcc
aagggctggaagaacttcgtccatcacgagaaggaccgcatcaaggacctgcgccacgag
atccagtcgctggcggcgctcaccgggctcgagatcggcgaattccgcaagatcgtgcac
ggtgtgcagaagggcgagcgcgaggcccgtcaggccaagaaggagatggtggaagccaac
ctccgtctcgtgatctcgatcgccaagaagtacaccaaccgcggcctgcaattcctcgac
ctgatccaggaaggcaatatcggcctgatgaaggcggtcgataagttcgaatatcgccgc
ggctacaagttctcgacctacgccacctggtggatccggcaggcgatcacccgctcgatc
gccgaccaggcccgcaccatccgcatccccgtgcacatgatcgagacgatcaacaagatc
gtccgcacctcgcgccagatgctgaacgagatcggccgcgagccgaccccggaagagctc
gccgagaagctcgggatgccgctggagaaggtccgcaaggtcctgaagatcgccaaggag
ccgctgtcgctcgaaactcctgttggtgacgaggaggattcgcatctcggcgatttcatc
gaggacaagaacgcgatcctgccgatcgacgccgcgatccaatcgaacctgcgcgaaacc
acgacgcgcgtgctggcctcgctcaccccgcgcgaggagcgcgtgctgcgcatgcgcttc
ggcatcggcatgaacaccgaccacacgctggaagaagtcggccagcagttctcggtcacc
cgcgagcgcatccgccagatcgaagccaaggcgctgcgcaagctgaagcacccgtcacgg
tcgcggaagctgcggtcgttcctcgataattaa
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