Bradyrhizobium quebecense: J4P68_0012875
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Entry
J4P68_0012875 CDS
T07890
Name
(GenBank) YadA-like family protein
KO
K21449
trimeric autotransporter adhesin
Organism
bqb
Bradyrhizobium quebecense
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bqb02000
]
J4P68_0012875
Transporters [BR:
bqb02000
]
Other transporters
Pores ion channels [TC:
1
]
J4P68_0012875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
Motif
Other DBs
NCBI-ProteinID:
UGY05566
LinkDB
All DBs
Position
complement(2628612..2634104)
Genome browser
AA seq
1830 aa
AA seq
DB search
MVVARNSTESLKRQGRTGFVRSWVASGDAGSYSLRRRLLAVLRQAHRRLGVKRDRLGLGS
LGAGGSTSAAAMTLGALAIMIAATSAASAQNYNAGSGSVATGTQATAIGTNASAAAGAGN
PTAVGAGAKANVTGGGSPIAIGTNANASGTGGVTALPGGGNSFEAVAIGNAAVATGQGSS
SLGPSASATGNWATSIGLLANASGYQATAVGVQAAASGQYTVALGRSAQASGTGGAMALG
AGTISSGVNSIALGVNANATTAGASALGTFASATGGNSTAVGVSSTANANYAFSGGWSSV
ASADSATALGKQAVASGINSFAGGSSASAAGAFAVALGNQAQAQSTGGAVAIGSGAIVNS
AATGGIALGNNAASAGISSIATGVGASAAGTSSLAIGTTSNASGAASTAVGNTAVASGQN
SSSFGSGANATGDNSLAAGVSASASGIASTALGIGAKASAASAIAVGNNAAASSANAVAL
GTNAVAAGGQAVSIGANNTAFGNGAVAIGDPSYASGTGAFTGGANNIANSDGTASATAAN
QANGAVAIGNNNNAIGQGSVALGNGSTAGAAGLAGNVALGNGATAAAKSGDVALGSGSVT
AAAVGTPSAVINGTTYTFQGTTPTSTVSVGAPGAERTITNVAAGRISGSSTDAVNGSQLF
ATNQAVDAIGTTVNNINNGGGIKYFHANSTLADSSAVGTDSIAVGPLASASGPNAIAVGT
SSTASALDSVSIGFISKATGLFSTAVGPNAQASGDSSTAIGQNAATAGVQATALGVNSSA
GAANALALGANANASNANAVALGYGSVTAAAVNTPNTVINGTTYSFAGTTATSTVSVGAL
GAERTITNVAAGRLNNGSTDAVNGSQLFATNQAVDGLATTVNNINTGGGIKYFHANSTLA
DSSAVGTDSIAVGPLASASGPNAIAVGTSSTASALDSVSIGFISKATGLFSTAVGPNAQA
SGDSSTAIGQNAATAGVQATALGVNSSAGAANALALGANANASNANAVALGYGSVTAAAV
NTPNTVINGTTYSFAGTTATSTVSVGALGAERTITNVAAGRISNASTDAINGSQLWATNQ
AVDGLATTVNNINTGGGIKYFHANSTLADSSAVGTNSVAIGPVSTATGSGSVSIGNGATA
ANANDIALGSGSQTTTAVGTSGITIGTTNYAFAGTNPLSTVSVGSLGSERTITNVAAGRV
SNGSTDAINGSQLFAATSAIDSLSTVVSNGLTHYYSVNDGGTQLANYTNNGATGANSMAA
GIAASATAANSTALGFNTQATVADGVAIGSGSISNRAIAPASGTIGGTIIPYNTTDLALL
GAVSVGNATSYRQITNVADGTQSSDAVTVRQLTGALSSFATTTTKYFHANSTLADSLAVG
NNSVAVGPQTVVNGDNGIGMGFGATVQQTAPGGIAIGQNSVSNFADSIAFGTNAQANGIQ
SVSIGAGAQTTNPTSVALGPNAKATAQAGDVALGANSTTSTVVKTTSTTIGGTTYAFAGT
APTSTVSVGSAGAERTVTNVAAGQISATSTDAINGSQLWATNTSLDALYTTVNNISTGSG
GIKYFHANSTAADSSATGAESVAIGPQSVASGANAVSMGNGSAASGANSVAIGAGAKATS
ANSLALGANSTTTANLSDAAYTPVVGKSVAGVATGEVSVGSSGAERRVTNVAAGSAATDA
VNVSQLQAVSSGSIRYDTDASGNTTNKVTLNSGSSGPVTVSNVAAGVAGTDAVNVNQLNS
AFQQLNGQIGEVRQDAWRAAAIGMAAASLRYDDRPGKISASAGGGVWRSQGALAFGIGYT
SENGRLRTNAAATTAGSEWGVSAGVSLTLN
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgcacgcaactcaaccgaatcgctgaagcgtcaaggccgcaccggcttcgtc
cggagctgggtcgcatcgggcgatgcgggcagctattcgctgcggcgccggctgttggcg
gtgttgcgtcaggcgcatcgcaggctcggcgtcaagcgtgaccggctggggctcggctcg
ctgggtgccggcgggtcgacgtcggctgccgccatgacgctcggtgcgctcgcgatcatg
attgccgcgacctcggccgcgagcgcccagaactacaacgccggcagcggcagcgtcgca
acgggcacccaggcgacggcgatcggcacgaacgcctctgcggcagccggggcagggaat
cccacggccgttggggcgggcgcgaaggcaaacgttacaggaggggggtctcccattgcc
atcggcacgaacgcgaacgcgagcggaaccggaggcgtgacggcgctccctggtggcggc
aacagttttgaggcggttgccatcggcaacgccgccgttgccacggggcagggtagttcg
agccttggccccagtgcgagcgcgacggggaactgggccacctccatcggcttgctcgcc
aatgcatcagggtatcaggcgacggcggtcggtgttcaggccgctgcgtcaggacaatac
acggtcgcgctcggccggagtgcgcaggcgtcgggcaccggcggcgcgatggcgctgggc
gccggcacgatctcaagcggcgtcaattcgattgcgctcggcgtcaacgccaatgccacc
acagccggcgcgagcgccttgggcaccttcgcgagtgccaccggcggcaactccaccgcc
gtcggcgtcagttccacggctaacgccaactatgccttctccggaggctggtcgtccgtt
gcctcggcggacagcgcgactgcgcttggcaagcaagcggtcgcgtcggggatcaactca
ttcgccggaggtagctcggccagcgcagccggagctttcgccgtcgccttgggtaaccag
gcgcaggcgcagagcaccgggggggcggtcgcaatcggatcgggcgcgatcgtcaacagt
gccgcgacgggcggcatcgcgctcggtaacaatgcggcatccgccggcatcagttcgatc
gcgaccggcgtcggggccagcgccgccggcacaagttcgctggcgatcggcacgacctca
aatgcgagtggcgccgccagcactgcggttggcaacacagccgttgccagcggccaaaac
tcctcctcattcgggtctggagcgaacgcgacaggagacaattctctcgcggccggcgtc
agcgccagcgccagcggaatcgccagcaccgcgctcggcatcggcgccaaggcgtcggct
gcaagcgccatcgccgtcggcaacaatgccgcggccagttccgccaacgcggtcgccctg
ggcaccaacgcggtggcggccggcggccaggcggtctcgatcggcgcgaacaacaccgcc
tttggcaatggcgcggtggcgatcggcgatcccagctatgcgagcggcaccggcgccttc
accggcggcgcgaacaacatcgccaacagcgacggtacggccagcgccaccgccgccaac
caggccaacggcgccgtcgcgatcggcaacaacaacaacgcgatcgggcagggctccgtg
gcgctcggcaatggctccaccgcgggcgccgccggtcttgcgggcaacgtcgcactgggc
aacggcgccacggcggcggcaaaatccggcgatgtcgcgctcggctccggcagcgtcacg
gctgccgcggtcggcacgccaagtgcggtgatcaacggcaccacctacaccttccagggc
acgactccgacctcgacggtgagcgtcggcgcacccggtgccgagcgcaccattacgaat
gtcgccgccgggcggatcagcggatcctcgaccgacgcggtcaacgggtcgcagctgttt
gcgaccaaccaggctgtcgacgccattggcaccaccgtcaacaacatcaacaatggcggc
ggcatcaagtatttccatgccaattcgacgctggcggattcctccgccgtcgggaccgac
tcgatcgcggtcggtccgctggcgagcgcgagcggccccaatgccatcgccgtcggcact
tcctccactgcatcggcgctcgacagcgtgtcgatcggattcatctccaaggcgacaggc
ctattcagcaccgcggtcggccccaacgcccaggcctctggcgactccagcaccgcgatc
ggccagaacgcggctactgcgggcgttcaggcgaccgcgctcggcgtcaattcgagcgcc
ggtgccgcgaatgcgctcgcgctcggtgccaacgccaacgcctcgaacgccaacgcggtc
gcgctcggctacggcagcgtcaccgccgccgccgtcaacacgccgaacacggtgatcaac
ggcaccacctacagcttcgccggtacgacggcgacctcgaccgtcagtgtcggtgcgctc
ggcgccgagcgcaccatcaccaatgttgccgccgggcggctcaacaacgggtcgacggat
gcggtcaacgggtcgcagctgtttgcgaccaaccaggcggtcgacggcctcgccaccacc
gtcaacaacatcaacaccggcggcggcatcaagtatttccacgccaattcgacgctggcg
gattcctccgccgtcgggaccgactcgatcgcggtcggtccgctggcgagcgcgagcggc
cccaatgccatcgccgtcggcacttcctccactgcatcggcgctcgacagcgtgtcgatc
ggattcatctccaaggcgacaggcctattcagcaccgcggtcggccccaacgcccaggcc
tctggcgactccagcaccgcgatcggccagaacgcggctactgcgggcgttcaggcgacc
gcgctcggtgtcaattcgagcgccggtgccgcgaatgcgctcgcgctcggtgccaacgcc
aacgcctcgaacgccaacgcggtcgcgctcggctacggcagcgtcaccgccgccgccgtc
aacacgccgaacacggtgatcaacggcaccacctatagcttcgccggtacgacggcgacc
tcgaccgtcagcgtcggtgcgctcggcgccgagcgcaccatcaccaatgtcgcggcgggc
cggatcagcaacgcttcgaccgatgcgatcaacggctcgcagctctgggccaccaaccag
gcggtcgacggcctcgccaccaccgtcaacaacatcaacactggcggcggcatcaagtat
ttccacgccaattcgacgctggcggattcctccgccgtgggcaccaactccgttgcgatc
gggccggtgtcaaccgcgaccggcagcggctcggtgtcgatcggcaacggcgcgacggcg
gccaacgccaacgacatcgcgctcggctccggcagccagaccaccacggcggtcggcacg
tcaggcatcaccatcgggaccaccaactatgcattcgccggcacgaatccgctctcgacg
gtcagcgtcggctcgctcggcagcgagcgcaccatcaccaatgtcgcggcggggcgggtc
agcaacggctcgacggatgcgatcaacggttcgcagctgtttgccgccacttcggcgatc
gacagtctctcgaccgtcgtcagcaacggcctgacacattattatagcgtcaacgacggc
ggcacccagctggcgaactacaccaacaacggtgcgaccggtgcgaattcgatggccgcc
ggcatcgccgcgtcggcaacggcggcgaattccaccgcgctgggcttcaacacccaggcc
acggtcgccgatggcgttgcgatcggctcgggatcgatctccaaccgcgcgatcgcgccg
gcttccggcacgatcggcggcaccatcatcccctacaacaccaccgatctcgcgctgctc
ggcgcggtgtcggtcggcaatgcgacgagctatcgccagatcaccaatgtcgccgacggc
acgcagtcgagcgacgccgtcaccgtgcggcagctgaccggcgcactgtcgtcgttcgcg
accacgacgacgaaatacttccacgccaattcgacgctcgccgactcgctcgcggtcggc
aacaactcggtcgcggtggggccgcagaccgtggtcaacggcgacaacggcatcggcatg
gggtttggcgcaaccgtgcagcagaccgcgcccggcggcattgcgatcggccagaattcg
gtgtccaacttcgccgactcgatcgcgttcggaaccaatgcgcaggccaacggcatccag
tcggtctcgatcggcgccggagcccagaccaccaacccgaccagcgttgcgctcggcccg
aacgccaaggcgacggcgcaggccggcgacgtcgcgctcggcgccaattcgaccacctcg
acggtggtcaagaccaccagcaccacgatcggcggcaccacctacgccttcgccggcacg
gcgccgacctcgaccgtcagcgtcggcagcgccggggcggaacgcaccgtcaccaacgtc
gccgcgggccagatcagcgcgacctcgacggacgcgatcaacggctcgcagctctgggcc
accaacacctcgctcgacgctctctatacgacggtcaacaacatctcgaccggcagcggc
ggcatcaagtatttccacgccaactccaccgcggcggattcgtccgccaccggcgcggag
agcgtcgcgatcggaccgcaatcggtcgcaagcggcgcgaacgcagtgtcgatgggcaac
ggctcggccgcatcgggcgccaactcggtcgcgatcggcgccggcgccaaggcgacttcg
gccaattcactggcgctcggcgcgaactcgaccaccacggccaatctgagcgatgcggcc
tatacgcccgtcgtcggcaagagcgtcgcgggggttgcgaccggcgaagtgtcggtcggc
tcgtccggggccgaacgccgcgtcaccaatgttgccgccggctcggctgcgactgatgcg
gtcaatgtcagccagctccaggcggtttccagcggctcgatccgctacgacaccgatgcc
tcagggaacaccaccaacaaggtgacgctgaatagcggcagcagcgggccggtcaccgtc
agcaacgtggcggcgggcgtcgccggcaccgatgcggtgaacgtcaaccagctcaacagc
gcattccagcagctcaacggccagatcggcgaggtgcggcaggacgcctggcgtgcggcc
gcgatcggcatggccgccgcatcgctgcgctatgacgaccggcccggcaagatcagcgca
tcggccggcggcggcgtctggcgcagccagggcgcgctcgccttcggaatcggctacacc
agcgagaacggccggttgcgcaccaacgcggcggcgaccaccgccggcagcgagtggggc
gtcagcgccggcgtgagcctgacgctcaattga
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