Bradyrhizobium quebecense: J4P68_0016025
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Entry
J4P68_0016025 CDS
T07890
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb03030
DNA replication
bqb03410
Base excision repair
bqb03420
Nucleotide excision repair
bqb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4P68_0016025 (polA)
03410 Base excision repair
J4P68_0016025 (polA)
03420 Nucleotide excision repair
J4P68_0016025 (polA)
03440 Homologous recombination
J4P68_0016025 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bqb03032
]
J4P68_0016025 (polA)
03400 DNA repair and recombination proteins [BR:
bqb03400
]
J4P68_0016025 (polA)
Enzymes [BR:
bqb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4P68_0016025 (polA)
DNA replication proteins [BR:
bqb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J4P68_0016025 (polA)
DNA repair and recombination proteins [BR:
bqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J4P68_0016025 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4P68_0016025 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UGY06144
LinkDB
All DBs
Position
3337997..3341050
Genome browser
AA seq
1017 aa
AA seq
DB search
MPKTASKDPAKLAPKTATMPVAAKPVTAKAAAKGDHVFLVDGSGYIFRAYHALPPLNRKS
DGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIVFDKSEVTFRNKLYPDYKAHRPPAPDD
LIPQFALIREAVRAFELPCLEQAGFEADDLIATYARLATERGATTTIVSSDKDLMQLVND
KVVMYDTMKDRRIGRDEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIIE
YGDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEVPLDDLAVHEPDSR
RLIAFLKAMEFSTLTRRVADYAQIDPADVDADPGNKSGASVFSPLPPSDVTPAPGDAPTS
AAAPPARAKPTGARDDKNSSLKGTPATLAEARGEAIRKTGFDRKAYQAIGSLDQLNAFVA
RAHDTGYIAIEAMSESIDPMQAELSGLALAVAPNDACYIPLSHRQAGGGAGLFDAGLAPG
QIKTAEALKALKPLLESAGIQKVGFNVKFTSVTLAQHGVTLRNIDDAQLMSYALDAGRGS
HALEALAERWFGHAVVSYGGLVGSGKGKLTFDQVTIDKATEYAAESADLILRLWRVLKPR
LVAERMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGE
PVNVGSPKQIGDIIFGKMGLPGGTKTKTGAWSTTAQVLDELAEQGHEFPKKILEWRQVSK
LKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIA
TPGHKLVSADYSQIELRLLAEIADVPVLRQAFRDGLDIHAMTASEMFGVPIKDMPSEVRR
RAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETKDFCRRNGYV
TTLFGRKCYYPDIKASNASVRAFNERASINARLQGTAADIIRRAMIRVEDALAEKKLSAQ
MLLQVHDELIFEVPDNEVAATLPVVQRVMQDAPFPAVILSLPLQVDARAANNWDEAH
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacagcctccaaagaccccgccaagctagccccgaagaccgcaaccatgccc
gtcgccgccaagcccgttacagccaaggccgcggcgaagggcgaccacgtcttcctggtc
gatggttcgggctacatcttccgcgcctatcatgcgctgccgccgctgaaccgcaagtcc
gacgggctgcaggtcaatgccgtgctcggcttctgcaacatgctgtggaagctgttgcgc
gacatgccggaggacaaccggccgacccatctggcgatcgtgttcgacaagtcggaggtc
acgttccgcaacaagctctatcccgactataaggcgcaccggccgccggcgcccgacgat
ctgatcccgcaattcgccctgatccgcgaggcggtacgcgccttcgagctgccctgcctc
gagcaggccggcttcgaggccgacgatctgatcgcgacctatgcgcggctcgccaccgag
cgcggcgcgaccacgacgatcgtgtcatcggacaaggatctgatgcagctcgtcaacgac
aaggtcgtgatgtacgacacgatgaaggatcgccgcatcggccgcgacgaagtgatcgag
aaattcggcgtgccgcccgagaaggtcgtcgaggtgcaggcgctggccggcgattccacc
gacaacgtgcccggcgtccccggcatcggcatcaagaccgccgcgcagctgatcatcgaa
tatggcgatctcgatcagctgctgttccgcgccggcgagatcaagcagccgaagcggcgc
gaggcgctgctcgagaacgccgagaaggcgcgcatctcgcgccagctcgtgctgctcgat
gacaaggtcgatctcgaggtgccgctcgacgacctcgcggtgcacgagcccgactcgcgc
cggctgatcgccttcctcaaggcgatggagttctccaccctcacccgccgtgtcgccgac
tatgcgcagatcgaccccgccgatgtcgatgccgatcccggcaacaagagcggcgccagc
gtgttctcgccgctgccgccgtcggacgtgacgccggcgccgggagacgctccgacatca
gccgcagcaccacctgcgagggccaagccgaccggcgcacgcgacgacaagaactccagc
ctgaagggcacgccggcaacgctggccgaggcccgcggcgaagcgatccgcaagaccggc
ttcgatcgcaaggcctaccaggcgatcggcagtctcgatcagctcaacgcctttgtcgcg
cgcgcgcacgacaccggctacatcgcgatcgaggcgatgtcggaatcgatcgacccgatg
caggccgaactgtcgggactggcactggcggtggcgcccaacgacgcctgctacatcccg
ctcagccaccggcaggccggcggcggcgccgggctgttcgatgccggcctcgcgcccgga
cagatcaagaccgccgaggcactgaaggcgctgaagccgctgctggagtccgccggcatc
cagaaggtcggcttcaacgtcaagttcacctcggtgaccctggcgcaacacggcgtcacg
ctgcgcaacatcgatgacgcgcagctgatgtcatacgcgctggatgccggccgcggctcg
catgcgctggaggcgctcgccgagcgctggttcggccatgcggtcgtcagctacggcggc
ctcgtcggcagcggcaagggcaagctgaccttcgatcaggtcacgatcgacaaggcgacc
gaatatgcggccgagagcgccgacctgatcctgcggctgtggcgggtgctgaagccgcgc
ctcgtcgccgagcggatgacgacggtctacgagacgctcgagcggccgctggtgtcggtg
ctggcgcggatggagcgccgcggcatctcgatcgaccgccaggtgctgtcgcgactgtcg
ggcgatttcgcccagaccgcggcgcgggtcgaggccgagatccaggagatcgccggcgag
ccggtcaatgtcggcagtccgaagcagatcggcgacatcatcttcggcaagatgggattg
cccggcggcaccaagaccaagaccggcgcctggtcgaccaccgcgcaggtgctcgacgag
ctcgccgagcagggccacgaattcccgaagaagattctggagtggcgccaggtctcgaag
ctgaaatcgacctacaccgacgcgctgccgacctacgtcaacccgcagacccatcgcgtc
cacacgacctacgcgctggctgcgaccacgacgggccggctgtcgtcgaacgagccgaac
ctgcagaacatcccggtgcgcaccgaggacggccgcaagattcgtcgcgccttcatcgcg
acgccgggccacaagctggtgtcggccgattactcccagatcgaactacggctgctcgcc
gagatcgccgacgtgccggtgctgcgccaggcgttccgcgacgggctcgacattcacgcc
atgaccgcctccgaaatgttcggcgtgccgatcaaggacatgccgagcgaggtgcgccgc
cgcgccaaggcgatcaatttcggcatcatctacggcatctcggcgttcggcctcgccaac
cagctcggcatcgcgcgcgaggaagcttccgcctacatcaagaagtatttcgagcgcttc
ccgggcatccgcgcctacatggacgagaccaaggacttctgccgccgcaacggctatgtg
acgacgctgttcggccgcaagtgctactaccccgacatcaaggcgtccaacgcctcggtg
cgcgccttcaacgaacgcgcctcgatcaacgcgcgcctgcagggcaccgcggccgacatc
atccgccgcgccatgatccgggtcgaggacgcactcgccgagaagaagctctcggcgcag
atgctgctgcaggtgcatgacgagctgatcttcgaggtgcccgacaacgaggtcgcggcg
acgctgcccgtggtgcagagggtgatgcaggacgcgccgttcccggccgtgatcctgtcg
ctgccgctgcaagtcgatgcccgcgccgcgaacaactgggacgaggcgcattag
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