Bradyrhizobium quebecense: J4P68_0016950
Help
Entry
J4P68_0016950 CDS
T07890
Name
(GenBank) cadherin domain-containing protein
Organism
bqb
Bradyrhizobium quebecense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Peptidase_M10
He_PIG
Big_9
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
UGY06314
LinkDB
All DBs
Position
3538795..3546864
Genome browser
AA seq
2689 aa
AA seq
DB search
MTTIPAYTIGGLTRPELHLDPTGHIILDPAAQAFADTYGLQYLYLGCPPGTLWPPIQGFL
APPTDANSSTNTVVEGAAANTSVGITAQSSSLIGLPVTYSLTSDSSHGGFKVDPNTGVIS
VADPTKVDFESSGGSYIVNVQATDGIFASSQSFTIAVSNAPPSTPVDSNAAANAVNEGAA
VNTLAGITASSADVNGPGVTYSLTGDTSGGGFKIDPNTGVVTVADSTKLDFETAPSHAYT
ITVQASDGHGGFSSQSFTINVNDVPVSTPVDTNPAANSVVEGAAVNTLVGITASAVDPNG
PASTYSLTGDTSGGGFKIDPNTGVVTVADPTKLDYESAPGHAYTITVHATAGATSSTQTF
TIGVTDAPPSAPTDTDVTANSVVEGAAIGTAVGITAHATDINGGAVTYSLVGDAHGFTID
VATGIVTVADPTKIDFETAPGHAYTITAQASDGTLTSTQNFTINVTDVAPSTPVDSNAAA
NTVVEGATAGTAVGITAHAVDINGPAVTYSLTGDTSGGGFAIDAATGIITVADPTKINYE
SAPGHAYTVTATASDGTLASSQTFTIGVTNAPPSAPVDADANPNSIAEGAANGSTVGVTA
SAIDVNGPPVTYSLVGDTSGGGFTIDATTGVVTVADGTKIDYESAPGHAYTITAQASDGQ
GGTSTQSFTIAVTDVAPSTPVDSDVGANTAVEGAAAGSTVGITASAIDVNGPAVTYSLTG
DTSGGGFTINATTGVVTVADPTKIDYETSGAAHSYTITAQASDGTLASSQTFTIAVTDVA
PSTPVDSNVAANSVVEGAAAGSTVGVTASSTDVNGPAVTYSLVGDTSGGGFTINATTGVI
TVADPTKIDYESSGPTHSYAVTAQASDGTLTSSQTFTIAVNDAPPSTPVDADATPNSIAE
GAANGSTVGITASSVDVNGPAVTYSLIGDTSGGGFTINAATGVITVADSTKIDYESAAGH
AYTVTAQASDGTLASSQTFTIAVNDVAPSTPVDSDGAINRVAVGAPVGSGTGVTASSTDV
NGPAVTYSLVGDTSGGAFTINAATGKVTVADPTKIHAADPSYDVTVDSSDGTLHSQQTFT
IAVVIDAAPVVTAGHTLNYTENQVATAIDSAITVTDSDNATLDHATVQITDHYVSGEDVL
GFVNTATITGTFDAATGTLTLTGIDSVANYQAALASVTYFNTSDNPSGLARTVTITANDG
TLDSTPVTDTINVTPVNDPPVVTAGHALNYTENQVATAFDPAITVTDVDNTTLAGATVQI
TGNYANGQDVLGFTTIGNITGTFDAATGKLTLTGTDTVADYQAALASVTYFNTSDNPSGL
ARTVTITANDGAANSTAVTDTINVTPVNDPPVTSAGGTLNYIENQAATAIDTSVNVSDVD
SANMASATVAITGGFAAGQDVLGFINQNGINGSYNAAIGVLTLTGSSSVANYKAALDSIT
YFNTSDNPSGADRTVSFTVNDGSLDSNTSTSTIHVTPVNDAPVISFGAIAGFTEPPNGTP
AANSTPVTITPNLTISDAEGNNLTDATFVLNDLKPSDALSIAGHAGTSGDIGGIHFDISS
TAGTETISFTGTDTLAHYNAALDLIQFNNTSENPDTTARSYTLTVHDDGGTANGGNNTGT
ASTTGSVTAVNDAPTATVPADNSIGTAFSHTNLTISGLSVADVDAGSGNVTATIASNHAA
LSFDTTGLASFTNNASHTVTLTGTIAQVNTALATLTYNSDDGFTGSDTVTLNVNDNGNTG
TPGAQTSGPQTFHVGVVPQVFYIDNSTTGTSLNLGTQHDPYTSIAAFNAANPAGSGDYVV
LEHGTGTYSEANGINLASGVNLIGGSHTLTFTNPVTNATVTANVGSGTDPVIHVTGADNG
IDLLGTSGHTITGVSIDTSASTGIGISDDGNNVGTVTMSDITVKTASGAGLSFTHGGTIT
VTGSNNTITSTTGTALDVEHTNIGAGNLTFKSISATGSSGNAGIILDTTGAAGGLTVTGT
GSAGSGGTINNKTGGDILSGTDAGGQTTSGDGGTGIFLHNTANVSLTGMTLHDFSNFAIY
GNGVTNFTLANSAISGTNGTTNAGDREESSIRFDNLLGTASITGSSISGGFTQNVDLYNT
SGTLNRLTMDSDTFGLIGSSGNDNVLGQVYNSATANYTVTNSTFSGTRSDFIAFAANNNS
SMDAVVRSNTFHNGQAIVPGGGTAVDIRSGSGGNVSAATTTFDISHNILTDGGANAFDTV
GIFVAKGQDNGTMSGTIASNDIGPAKVGSNSDGIFVRDAGAGSLTTLIQNNTITGVGDAG
IALQNNDGSSTLNATLYGNSVSSPTSNSPFAALDVENGATATDTSTTNVVIGMGAGGTGS
KNTLNHSALYATDVELSNFGASTHLNLSKNGSTSGTAAGVITDDNTSTTGGITVDTTGGN
GTTTLVSTLPALPAVVAPLLAEAGGVQASTPSTGEMHLTQAELNSVVSAAIAEWASAGAN
ATQLALLHAATFSIADLAGQIVGQEGALHITIDADAAGHGWFIDPTPSDNFEFTHAVNAA
GTDLLTDPSTAAAGHLDLLTTVVHELGHVLGLPDSVSPSDANSLMYIGIADGERRLATTS
DVAQSNAALQKAMPTQGTSTSNQQTATLQTTGTFKVTGGDSFDFSSLTQTQSQTNTNHVD
VATNTQTLSDLFSGQSSAATPWWVGHEAAYAAMGGNPTDHLQTHHDLVV
NT seq
8070 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatacctgcctatacaatcggtggtttaacgcgccccgaacttcacctcgat
ccgaccggacatatcattcttgatccggccgcgcaggcgttcgccgacacgtatggtctg
cagtatctctacctcggctgccctcccggtacactctggccgccgatccagggcttcctg
gcgccgccgaccgatgccaattccagcaccaacacggtcgttgaaggcgccgcggccaac
acctcggtcggcatcaccgcgcagtcgagcagcctgatcggccttccggtcacctattcg
ctgacatccgattcctcccatggcggcttcaaggtcgatccgaacaccggcgtgatctca
gtcgccgatcccaccaaggtcgacttcgagagctccggcggcagctacatcgtcaatgtg
caggcaaccgacggcatcttcgcctcgtcgcagagcttcacgatcgcggtcagcaacgcg
ccgccatccacaccggtcgacagcaacgccgccgccaacgccgtcaacgagggcgccgcc
gtcaataccctggccgggatcaccgcatcgtcggccgatgtcaacggccccggcgtcacc
tattcgctgaccggcgatacgtccggcggcggcttcaagatcgatcccaacaccggcgtc
gtcaccgtcgccgattccaccaaactcgacttcgagaccgcgccgagccacgcctacacc
atcaccgtgcaggccagcgacggccatggcggctttagctcgcagagcttcacgatcaac
gtcaacgacgttccggtctctacgccggtcgacaccaatcccgccgccaacagcgtcgtc
gaaggcgccgccgtcaacacgctggtcggcatcacggcgtccgcggtcgatccgaacggt
cccgcaagcacttactcgctgaccggcgacacctccggcggcggcttcaagatcgatccc
aataccggcgtcgtcacggtcgccgatccgaccaagctcgactatgagagcgcgcccggc
cacgcctacaccattaccgtgcacgcgaccgccggcgcgacctcgtcgacccagaccttc
accatcggcgtcaccgacgcaccgccgtcggcgcccaccgataccgacgtcacggccaat
tcggtggtcgaaggcgcggccatcggtaccgcggtcgggatcaccgcccacgccaccgac
atcaatggcggcgccgtgacctattcgctggtcggcgatgcgcacggcttcaccatcgac
gttgcgaccggcatcgtcaccgtcgccgatccgaccaagatcgatttcgaaaccgccccc
ggccacgcctacaccatcaccgcgcaggccagtgacggcacgctgaccagcacgcagaat
ttcaccatcaacgtcaccgacgtggcgccatcgaccccggtcgacagcaacgccgcagcc
aacaccgtcgtcgaaggcgcaaccgccggcaccgcggtcggcatcaccgcgcatgcggtc
gacatcaacggcccggccgtgacctattcgctgaccggcgatacctccggcggcggcttc
gcgatcgatgcggcgaccggcatcatcaccgtcgccgacccgaccaagatcaactatgaa
agcgcgcccggccacgcctacaccgtgacggcgaccgccagcgacggcacgctcgcgagt
tcgcagaccttcactatcggcgtcaccaacgcgccgccgtcggccccggtcgacgccgac
gccaaccccaattcgatcgccgaaggcgcggccaacggctcgacggtcggcgtcaccgcg
tcggcgatcgacgtcaacggcccgcccgtcacttactcgctggtcggcgacacctccggc
ggcggcttcaccatcgacgcgacgacgggtgtcgtcaccgtcgccgacggcaccaagatc
gattacgaaagcgcgcccggccacgcctacaccatcaccgcgcaggccagcgacggccag
ggcggcaccagcacgcagagcttcaccatcgctgtgacggacgttgcgccatcgaccccg
gtcgatagcgacgtcggcgccaacacggccgtcgaaggcgccgccgccggcagcacggtc
ggcatcaccgcgtcggcgatcgacgtcaacggcccggccgtgacctattcgctgaccggc
gacacctcgggtggcggcttcaccatcaacgcgacgaccggcgtcgtcaccgtcgccgat
cccaccaagatcgattacgaaaccagcggcgcggctcacagctataccattaccgcacag
gcgagcgacggcacgctggcgagttcgcagaccttcaccatcgccgttaccgacgttgcg
ccgtcgaccccggtcgacagcaacgtcgccgccaacagtgtcgtcgaaggcgccgccgcc
ggcagcacggtcggcgtcaccgcgtcatcgaccgacgtcaatggcccggccgtcacctat
tcgctggtcggcgacacctcgggcggcggcttcaccatcaacgcgacaacgggtgtcatc
accgtcgccgaccccaccaagatcgactacgagagcagcggcccaacccattcctacgcg
gtgaccgcgcaagccagcgacggcacgcttacgagctcgcagaccttcaccatcgccgtc
aacgacgccccgccgtcgaccccggtcgatgccgacgccactcccaattcgatcgccgaa
ggcgcggccaacggttcgaccgtcggcatcaccgcatcgtcggtcgacgtcaacggcccg
gccgtgacctattcgctgattggcgacacctccggcggcggcttcaccatcaacgcggct
acgggcgtcatcaccgtcgcggactcgaccaagatcgactacgaaagcgcggccgggcac
gcctataccgtcaccgcccaggcgagcgacggtacgctcgcgagctcgcagaccttcacc
atcgctgtcaacgacgtcgcgccatcgaccccggtcgacagcgacggcgccattaaccgc
gtcgcagtcggcgcaccggtcggttcgggaaccggcgtgacggcatcctcgaccgacgtc
aacggcccggccgtgacctattcgttggtcggcgatacctccggcggcgccttcaccatc
aatgcggcaaccggcaaggtcacggtcgccgaccccaccaagatccacgccgccgatccg
tcctacgacgtcacggtcgattcctccgacggcacgctgcacagccagcagaccttcacc
atcgcggttgtcatcgacgcagccccggtcgtcaccgccggccacaccctgaactacacg
gaaaaccaggttgcgaccgcgatcgattcggcgatcaccgtcaccgattccgacaacgcc
acgctcgaccacgcgacggtccagatcaccgaccactatgtgagcggcgaggacgtcctc
ggcttcgtcaacaccgccacgatcaccggcacgttcgatgccgcgaccggaacgctgacg
ctgaccggcatcgattccgtcgccaactaccaggccgcgctggcgtccgtgacctatttc
aacaccagcgacaatccgtccgggctggcgcgcaccgtcacgatcacggccaatgacggt
acgctcgacagcacgccggtcaccgacaccatcaacgtcaccccggtcaacgacccgccc
gtggtcaccgccggccacgcgctgaactacaccgagaaccaggtcgcgaccgcgttcgac
ccggcgatcacggtcaccgacgtcgacaacaccacgctggccggcgctaccgtgcagatc
accggcaactatgccaacggccaggatgtcctgggcttcaccaccatcggcaacatcacc
ggcacgttcgatgccgcgaccggcaaactgacgttgaccggcaccgacacggtcgccgac
taccaggccgcgctggcctcggtgacctatttcaacaccagcgacaacccgtcgggcctg
gcgcgcacggtgacgataacagccaatgacggcgccgcgaattccacggcagtcaccgac
accatcaacgtcacgccggtcaacgatccgccggtcacgtcagccggcggcacgctgaac
tacatcgagaaccaggccgcgaccgcgatcgacacgtcggtcaacgtgtccgacgtcgac
agcgccaacatggccagcgccacggttgctattaccggcggcttcgccgcgggccaggac
gtgctcggcttcatcaaccaaaacggcatcaacggatcgtacaacgccgcgatcggcgtt
ttgacgttgaccggctcctccagcgtcgcgaactacaaggccgcgctcgactccatcacc
tatttcaacaccagcgacaatccgtccggggcggatcgcaccgtcagcttcacggtcaat
gacggctcgctggacagcaacacctcgacctcgaccatccatgtcacgccggtcaacgac
gcgccggtgatcagcttcggcgccattgccggattcaccgaaccgccgaatggcacgccg
gcagcgaactcgacgccggtgacgatcacgccaaacctgacgatatcagacgccgaaggc
aacaacctgaccgatgcgaccttcgtgctgaacgatctgaagccgtcggacgcgctctca
atcgcggggcacgccggcaccagcggcgacatcggcgggatccacttcgacatcagcagc
accgccggaacggaaacgatcagcttcaccggcaccgacacgctggcgcactacaatgcg
gcgctcgacctgatccagttcaacaacaccagcgaaaaccccgataccaccgcgcgttcc
tataccctgaccgtgcacgatgacggcggcaccgccaacggcggcaacaacaccgggacg
gcatcgacgacgggaagcgtgaccgccgtcaacgatgcgcccaccgcgacggtgccggcg
gacaattcgatcggcaccgccttctcgcacaccaatctcacgatctccggcctgtcggtc
gccgacgtcgacgccggcagtggcaacgtcacggcgacgatcgcctcaaaccacgcggcc
ctgagcttcgacaccacggggctcgcgagcttcaccaacaacgccagccacaccgtcacg
ctcaccggcaccatcgcgcaggtcaataccgcgctggcgacgctgacctacaacagcgac
gacggcttcaccggctcggataccgtcacgctcaacgtcaacgacaacggcaacaccggc
acacccggcgcgcaaacctccggcccgcagaccttccatgtcggcgtcgtgccgcaggtg
ttctacatcgacaactcgacgacaggcaccagcctcaacctcggtacccagcacgatccc
tacacctcgatcgcggccttcaacgcggcgaatccggccggctccggcgactatgtcgtg
ctcgagcacggcaccggcacctacagcgaagccaacggcatcaacctcgccagcggcgtc
aacctgatcggcggcagccataccctgacgttcaccaatccggtgaccaacgccacggtg
accgcgaatgtcggctccggcaccgatccggtcatccatgtcaccggcgccgacaacggc
atcgacctgctcggcacgtcaggccacaccatcaccggcgtcagcatcgacacctcggcc
tcgaccggcatcggcatcagcgacgacggcaacaatgtcggcaccgtcacgatgtccgac
atcacggtcaagacggccagcggtgccggcttgagcttcacccatggcggcaccatcacc
gtcacaggcagcaacaacaccatcacgtcgacgactggcactgccctcgatgtcgagcac
accaacatcggcgccggcaatctcaccttcaagagcatttcggcgacaggctcgtcgggc
aatgccggcatcatcctcgacacgacgggagctgccggcgggctcacggtcaccgggacc
ggctccgcgggatccggtggcacgatcaacaacaagaccggcggcgatatcctgagcggc
accgacgccggcgggcaaaccacatcgggcgacggcggtaccggcattttcctgcacaac
accgccaacgtgtcgctgactggcatgacgctgcacgacttcagcaacttcgcgatctac
ggcaatggcgtcaccaatttcacgctcgccaacagcgcgatcagcggcaccaacggcacc
accaatgccggtgaccgcgaggaaagcagcatccggttcgacaatctgctcggcaccgcg
tcgatcacgggatcgagcatttcgggcggcttcacccagaatgtcgatctctacaacacc
agcggcacgctgaaccgcctgaccatggacagcgacacgttcggcctgatcggctcgagc
ggcaacgacaacgtcctcggccaagtctacaactccgcgaccgccaactacacggtgacc
aacagcacgttttccggcacgcggtccgacttcatcgcgttcgccgccaacaacaattcg
tcgatggacgcggtagtgcggagcaacaccttccacaacggccaagcgatcgttcccggc
ggcggcacggcggtcgacatcaggagcggctccggcggcaatgtctccgccgcgaccacc
acgttcgacatctcgcacaacatcctgaccgacggcggcgccaacgccttcgacacggtc
ggcattttcgtggcgaagggccaggacaacggcaccatgtccggcaccatcgccagcaac
gatatcggcccggcgaaggtgggatccaactccgacggcatcttcgtccgcgacgcaggc
gccggcagcttgacgacgctgatccagaacaacaccatcaccggcgtcggcgacgccggc
atcgcgctgcagaataacgacggcagctcgaccctcaacgccacgctctacggcaactcg
gtgtcgtctccgacctccaacagtccgttcgcggcgctcgatgtcgagaacggggcgacg
gcgaccgacaccagtacgacgaatgtcgtcatcggcatgggtgccggcggcacgggcagc
aagaatacgctgaaccatagcgcgctctacgccaccgacgtcgagttgagcaatttcggc
gccagcacccatctgaacctctcgaagaacggttcaacatcggggaccgccgcaggcgtg
atcaccgacgacaacaccagcaccacgggcggcatcaccgtcgacaccacgggcggcaac
ggcacgacgacgctggtcagcacgctgcccgcactgcccgcggtggtcgcgccgctgctt
gccgaagcgggcggcgttcaggcgtcgaccccgagcaccggcgagatgcacctgacgcag
gccgagctcaattcggtggtgtcggcggcgatcgccgaatgggcgagtgcgggcgccaac
gcgacgcagcttgccctcctgcatgccgcgaccttcagcatcgccgacctcgcgggccag
attgtcggtcaggaaggcgccttgcatatcacgatcgacgccgatgccgccggccatggc
tggttcatcgacccgaccccgtcggacaatttcgaattcacccacgccgtcaacgccgcc
ggcaccgatctcttgaccgatccgtcgacggcggctgcgggtcatctcgatctgctgacc
accgtggtccacgaactgggtcacgtgctcggcctccccgactccgtttcgccatccgat
gccaacagcctgatgtatatcggcatcgccgacggcgagcgccggcttgccactacttcg
gatgtcgcccaatccaatgcggccctgcaaaaggcgatgcccacgcaaggcacctcaacc
tcgaaccagcaaaccgccactttgcagaccaccggtacgttcaaggtgaccggcggcgac
agcttcgacttctcgtcattgacccagacgcagtcgcagaccaacacaaaccacgtggat
gtggccacgaacacgcagactttatccgatctgttcagcgggcagtccagtgccgcgacg
ccatggtgggtcggccacgaggcggcctatgccgccatgggcggcaacccgaccgatcat
ctccagacccatcacgatctggtggtttga
DBGET
integrated database retrieval system
