Bradyrhizobium quebecense: J4P68_0018360
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Entry
J4P68_0018360 CDS
T07890
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb00300
Lysine biosynthesis
bqb00470
D-Amino acid metabolism
bqb01100
Metabolic pathways
bqb01110
Biosynthesis of secondary metabolites
bqb01120
Microbial metabolism in diverse environments
bqb01230
Biosynthesis of amino acids
Module
bqb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4P68_0018360 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4P68_0018360 (dapF)
Enzymes [BR:
bqb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J4P68_0018360 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
DUF2924
Motif
Other DBs
NCBI-ProteinID:
UGY06574
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All DBs
Position
complement(3859712..3860587)
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDLRDSKAQVSADEARAVASPAGGVPYDQLMVLQPPRLD
GTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQTSATFQTRAGLLNCWQGPAPDLYT
VDMDAPKFGWQDIPLAEEFRDTRYIELQVGPIDNPVLHSPSVVSMGNPHAVFWVDDVNAY
DLERFGPLLENHPIFPERANITLAHIVDRDHITIRTWERGAGLTRACGSAACATAVAAAR
LKRANRIVEITLPGGKLGIEWRERDDHVLMTGTADFEYEGRFDPALFANVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcgccaatcacgcattcgccaagatgaacggcatcggcaacgagatcgtc
gtcgtcgacctgcgcgattccaaagcacaggtttcggctgatgaggcgcgcgccgtggca
tcgccggccggcggcgtgccctatgaccagctgatggtgctgcagccgccgcggctcgat
ggcacggaagcgttcatctcgatctacaacaatgacggctcggaggccggggcctgcggc
aacggcatgcgctgcgtggtgcggcggatcttcgagaagaccggccagacatccgcgacg
ttccagacccgcgccggcctgctcaattgctggcaggggccggcgcccgatctctacacc
gtcgacatggacgcgccgaagtttggctggcaggacattccgctggctgaggaatttcgc
gacacccgctacatcgagctgcaggtcgggccgatcgacaatccggtgctgcattcaccc
tcggtggtctcgatgggcaatccgcacgcggtcttctgggtcgatgacgtcaatgcctac
gacctcgaacggttcgggccgctcctggaaaaccatccgatcttcccggagcgcgccaac
atcacgctcgctcatatcgtcgatcgcgaccacatcacgatccgcacctgggagcgcggc
gccggcctcaccagggcgtgcggctcggcggcctgcgcgacggcggttgcggcggcgcgg
ctgaagcgcgccaaccggatcgtcgagatcacgctgcccggcggcaagctcggcatcgag
tggcgcgagcgcgacgatcatgtgctgatgaccggcacagccgatttcgaatatgagggc
cgcttcgatccggcgctgttcgccaacgtcgcatag
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