Bradyrhizobium quebecense: J4P68_0019735
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Entry
J4P68_0019735 CDS
T07890
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bqb
Bradyrhizobium quebecense
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bqb03016
]
J4P68_0019735
Enzymes [BR:
bqb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J4P68_0019735
Transfer RNA biogenesis [BR:
bqb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J4P68_0019735
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UGY06831
LinkDB
All DBs
Position
4134363..4134977
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AA seq
204 aa
AA seq
DB search
MTIRLHRGDLPDLSRYTDSVAIDTETMGLHPHRDRLCVVQMSNGDGTADVIQIPKGHTDA
PNLKALLANPAITKIFHFARFDVAVLYNTFGVMPAPVYCTKIASRLSRTYTDRHGLKDLV
REVLNVELSKQQQSSDWGAQSLSEAQLAYAASDVLHLHALRDKLNVMLAREGRTDLAQAC
FDFLPTRARLDLDGWEAEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcatcgcggcgacctgcctgatctgtcccgctacaccgattccgtg
gcaatcgacaccgagaccatgggactgcatccgcaccgtgatcggctctgcgtggtgcag
atgtcgaacggcgacggcaccgccgacgtgatccagattccgaaggggcacaccgatgcg
ccgaacctgaaggcgctgctcgcgaatcctgcgatcaccaagatcttccatttcgcgcgg
ttcgacgtcgcggtgctctacaacacgttcggcgtgatgccggcgccggtctattgcacc
aagatcgcctcgcggctgtcgcgcacctataccgaccgccatggcctgaaggatctggtg
cgcgaggtgctgaacgtcgaattgtcgaagcagcagcagtcgagcgactggggtgcgcaa
agcctgagcgaggcccagctcgcctatgccgcgtccgacgtgctgcatctgcatgcgctg
cgcgacaagctgaatgtcatgctggcgcgcgagggacgcaccgatctcgcccaggcctgc
ttcgatttcctgccgacgcgcgccaggctcgatctcgacggctgggaggccgaggacatc
ttcgcccattcgtga
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