Bradyrhizobium quebecense: J4P68_0019755
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Entry
J4P68_0019755 CDS
T07890
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb02020
Two-component system
bqb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4P68_0019755 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4P68_0019755 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bqb03021
]
J4P68_0019755 (rpoN)
Transcription machinery [BR:
bqb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4P68_0019755 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UGY06834
LinkDB
All DBs
Position
4137967..4139622
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AA seq
551 aa
AA seq
DB search
MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAFVEEELERNPLLERAADGPEPPV
AGEPAMERPDYGDSDGSSSYGDEGEASDMTAGSGGEAAFEPGQEEWLNRDLGTRAEIEQT
LDTGLDNVFSEEPAEAAARAAQDAPPSVYTEWGGGASSDDEYNLEAFVAAELTLADHLAE
QLAVAFSAPAQRMIGQYLIDLVDDAGYLPADLGQAAERLGASQQAVDEVVAVLQKFDPPG
VCARNLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDIAALRKLCGVDDEDITDMIAEI
RRLDPKPGLKFGTARTQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYSELSKTIR
KDGDKSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTYGVAHLRPLNLKAVA
DAIQMHESTVSRVTANKYMATNRGSFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDG
EAASAILSDDTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLGNALSAPAS
SPDRSRDTAPV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcaaagactagagttccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcaactgtcgaacctggatctgtcggcctttgtcgag
gaagagctggagcgcaacccgttgctcgagcgggccgccgacgggccggaaccgccggtg
gcgggcgagccggcgatggagcggccggactacggcgattccgatggttcctcgagctac
ggagacgagggcgaggcgtccgacatgaccgcaggctcgggcggcgaggccgcctttgag
cccggccaggaggaatggctgaaccgcgacctcggcacccgcgccgagatcgagcagacg
ctcgataccggactcgacaacgtgttctccgaagagccggccgaagccgccgcgcgcgcc
gcgcaggacgcgccgccgtcggtctataccgaatggggtggtggcgcctccagcgacgac
gaatacaatctcgaagccttcgtggccgccgagctgacgctcgccgaccacctcgccgaa
cagctcgccgtggcattctcggcgccggcgcagcgcatgatcgggcagtatctgatcgac
ctggtcgacgacgccggctacctgccggccgatctcggccaggccgccgagcggctcgga
gcgtcgcagcaggcggtcgacgaagtcgtcgcggtgctgcagaagttcgatccgccgggc
gtgtgcgcgcgaaacctgagcgagtgcctggcgatccagctgcgcgagctcgatcgctac
gatccggcgatgcaggcgctggtcgagcatctcgatctgctcgccaagcgcgacatcgcg
gccttgcgaaagctgtgcggcgtcgacgacgaagacatcaccgacatgatcgcggagatc
cgccggctcgatccgaagccggggctgaagttcggcaccgcccggacgcagaccatggtg
cccgacgtctatgtgcgtccgggccccgacggcggctggcatgtcgagctcaacagcgac
actctgccgcgcgtcctggtcaaccagacctattactctgagctgtcgaagacgatccgc
aaggacggtgacaagtcgtacttcaccgactgcctgcagaacgcgacctggctggtccgc
gcgctcgatcagcgcgcccgcaccatcctgaaggtcgcaaccgaaatcgtccgccagcag
gacggattcttcacctatggcgtcgcgcacctgaggccgctcaatctgaaggcggtggcg
gatgcgatccaaatgcatgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcg
accaatcgcggcagttttgaattgaagtattttttcaccgcgtcgatcgcctccgccgac
ggcggcgaggcgcattcggccgaagcggtgcgtcaccacatcaagcaattgatcgacggc
gaggcggcgtcggcgatcctgtccgacgacacgatcgtggaacgtttgcgcgcttcgggc
attgatatcgcccgccgcaccgtcgcgaagtaccgcgaggcgatgcggataccatcctcg
gtgcagcgccgccgtgacaaacagagcatgctcggtaatgccctttcggctcctgcctcc
tcgcccgaccgctcgcgcgacacagcccccgtttag
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