Bradyrhizobium quebecense: J4P68_0019960
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Entry
J4P68_0019960 CDS
T07890
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bqb
Bradyrhizobium quebecense
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqb03400
]
J4P68_0019960 (addB)
Enzymes [BR:
bqb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4P68_0019960 (addB)
DNA repair and recombination proteins [BR:
bqb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J4P68_0019960 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UGY06872
LinkDB
All DBs
Position
complement(4176318..4179464)
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPVSAPFLRTVISALVDGRLVAGFEAQSDPAKLAGATLYLPTRRAGRLAREIFLD
VLDSDAAVLPRIVALGEIDEDELAFADQGDDVGGTAPLEIPPRLGELERRLTLAHLVAAW
AKTPVSAPLVVGGPASTLQLAGDLARLMDDMVTRGVDWRALDHLVPDQLDKYWQHSLDFL
RIARDAWPNYLKEIGRIEPAARRDQLIEAEAARLTAHHAGPVIAAGSTGSMPATAKFLHA
VAKLPNGAVVLPGLDTDLDEDSWDTIGGERGDDGRFTTPPSSNHPQFAMHALLDRFGIKR
RDVESLAEPTPLGREVLVSETMRPSTATAQWHDRLERPEIVARISAGMTNLTVVEAPNPE
MEALAIAVAMREARHLGKSAALVTPDRALARRVMASLTRWKLEFDDSGGDALMETPAGVF
ARLTAEAAAKGLEPPTLLALLKHPLFRLGGAHGALKRAIEVLEIALLRGTRPQAATSGLA
RDFARFRAELVKLHGGETSSLHAMEPRARLRDNELNQAQDLIVRLQTALAPLEGMASSKP
HDFAELAARHREALIALTADHNGVAIVFEERARASLASAFDELLAKQQPSGLMTPLSDYP
EVFQTAFADRMVRRPESVRAQLNIFGQLEARLTESDRVILGGLVEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGHDEVILTHAAKVGGAPAVASRFLHRLEAVAGEA
RWKAATTAGEIYVQYAAELDRPDTVKPIPQPEPRPPREARPLKMSVTAIEDWLRDPYTIY
ARYILKLDPLDPVDMPLSAADRGSAIHESLGEFTQVYADALPDDIKSALRDIGAKHFAPL
MERPEARALWWPRFQRIAAWFAEWEQARRGSIAAIKAEIRGEIGIPLDATRTFTLSARAD
RIERRDDGSFAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFAGIPAGSSVGDLVY
VRLSGNNPPGEQRSLELKIKTNDTPQPPDEAADSARRKLEDLIRAFDDEQQAYTSLNLSM
WANRYGAYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcagcgttcccgtttctgcgccgttcctgcgcaccgtcatttcggcgctg
gtcgatggccggctggtcgcgggattcgaggcgcagagcgatccggcaaagctcgccggc
gccacgctctatctgccgacccgccgcgccggacggctggcgcgcgagatcttcctagat
gtgctcgattccgacgccgcggtgctgccgcgcatcgtcgcgctcggcgagatcgatgag
gacgagctcgctttcgccgaccagggcgacgatgtcggcggcactgcgccgctggagatc
ccgccgagactcggcgagctcgagcgccggctgacgctggcgcatctggtcgcggcctgg
gcgaagacgccagtgtcggcgccgctggtggtcggcggcccggcctcgacgctgcagctc
gccggcgacctggcgcggctgatggacgacatggtgacgcgcggcgtcgactggcgcgcg
ctcgaccacctggtgccggaccagctcgacaaatactggcagcattcgctcgacttcctg
cgcatcgcgcgcgacgcctggccgaattacctcaaggagatcggccggatcgagcccgcg
gcgcgccgcgatcagctgatcgaggcggaagcggcgcggctgaccgcgcatcacgccggc
ccggtgatcgcggccggttcgaccggctcgatgccggccaccgcaaaattcctccacgcg
gtggcgaagcttccgaacggcgccgtggtgctgcctgggctcgacaccgatctcgacgaa
gattcctgggacacgatcggcggcgagcgcggcgacgatggcaggttcaccacgccgccc
tcgtcgaaccacccgcaattcgcgatgcacgcgttgctcgaccgcttcggcatcaagcgc
cgcgacgtcgagagccttgctgagcctacgccgctcggccgcgaggtgctggtgtcggag
acgatgcggccgtcgaccgcgaccgcgcaatggcacgaccggctggaacggcccgagatc
gtggcgcggatttccgccgggatgaccaatctcacggtggtcgaagcccccaatccggaa
atggaagcgctggcgatcgcggttgcgatgcgcgaggcgcggcatctcggcaaatcggcc
gcgctggtgacgccggatcgcgcactggcgcgccgcgtgatggcctcgctgacgcgctgg
aagctggagttcgacgattccggcggcgacgcgctgatggaaacgccggccggtgtgttc
gcccgcctcaccgcggaggccgcggccaaggggcttgagccgccgaccttgctcgcgctg
ctcaagcatccgctgttccggctcggcggcgcccatggcgcgctgaagcgtgcgatcgag
gtgctggagatcgcgctgctccgcggcacgcggccgcaagctgcgaccagcggcctcgcg
cgcgacttcgcgcgcttccgcgccgagctcgtcaagctgcatggcggcgagacctcgtcg
ctgcacgccatggagccgcgcgcccggctgcgcgacaatgagctcaaccaggcccaggac
ctgatcgtgaggctgcaaacggcgctggcgccgctggaaggcatggcctcgtcaaagccc
catgatttcgccgagctggcggcgcgtcaccgcgaggcgctgatcgcgctgacggccgac
cataacggcgtcgcaatcgtgttcgaggagcgcgcccgggcttcgctcgcgtccgccttc
gacgagctgctcgccaagcagcagccgagcgggttgatgacgccgctgtcagattatccc
gaggtgttccagaccgcgtttgccgaccgcatggtgcggcgaccggaatcggtgcgcgcg
caactcaacatcttcggccagctcgaggcgcgtctgaccgagtcggatcgcgtcatcctc
ggcggtctggtcgagggcgtctggccgccggcgccgcggatcgatccgtggctgagccgg
ccgatgcggcacgagctcgggctcgatctccccgaacggcgcatcggcctctccgcgcac
gactttgcgcagctgctcggccatgacgaggtgatcctcacccatgcggccaaggtcggc
ggcgcgcccgcggtcgcctcgcgcttcctgcaccggctcgaagcagtggcaggcgaagcg
cgctggaaggcggcgacaacggccggcgaaatttacgtgcaatatgcagccgaactcgac
cggcccgacaccgtcaagccgatcccgcagccggagccgcggcccccgcgcgaggcgcgg
ccgctgaaaatgtcggtcaccgcgatcgaggactggctgcgcgatccctacacgatctat
gcgcgctacatcctgaagctcgatccgctcgatcccgtcgacatgccgctgtcggcggcc
gatcgcggctccgcaatccacgaatcgctcggcgagttcacacaggtttatgccgacgcg
ctgcctgacgacatcaagagcgcgctgcgcgatatcggggccaagcattttgcgccactg
atggagcggcccgaggcgcgcgcgctgtggtggccgcgcttccagcgcatcgcggcgtgg
tttgccgaatgggagcaggcccggcgcggcagtattgctgcaatcaaggccgagatccgc
ggcgagatcggcattccgcttgacgcgacgaggacgttcacgctctccgcgcgcgccgac
cgcatcgagcgccgcgacgacggcagctttgcgatcctcgactacaagacgggccagccg
ccgaccggcaagcaggtgcgcatgggcctgtcgccgcagctcacgctggaagccgcgatc
ctgcgcgagggcggctttgccggcattccggcgggctcctcggtcggcgacctcgtctat
gtcaggctgagcggcaacaacccgccgggcgagcagcgttcgctggagctgaagatcaag
accaacgacacgccgcagccgcccgatgaagccgccgacagcgcgcggcgcaagctggaa
gatctgatccgcgccttcgacgacgagcagcaggcctacacctcgctgaacctctcgatg
tgggcgaaccgttacggcgcctatgacgatcttgcgcgcatcaaggaatggtccgcggcc
ggcggcctggggatcgaggaatggtga
DBGET
integrated database retrieval system
