Bradyrhizobium quebecense: J4P68_0020090
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Entry
J4P68_0020090 CDS
T07890
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4P68_0020090 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bqb03019
]
J4P68_0020090 (pnp)
03016 Transfer RNA biogenesis [BR:
bqb03016
]
J4P68_0020090 (pnp)
Enzymes [BR:
bqb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J4P68_0020090 (pnp)
Messenger RNA biogenesis [BR:
bqb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J4P68_0020090 (pnp)
Transfer RNA biogenesis [BR:
bqb03016
]
Prokaryotic type
tRNA degradation factors
J4P68_0020090 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Tricorn_2nd
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UGY06896
LinkDB
All DBs
Position
complement(4208013..4210169)
Genome browser
AA seq
718 aa
AA seq
DB search
MFNSHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKTPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEYVLNPTLDEMTETQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE
IEKEMLGIAEQDLRKAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE
LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEDQRFAVLS
DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMSK
ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAASRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQETGEDLEAKQKTDAPAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattcgcattccgtcgagatcgactggggtggacgtcccctcaaacttgaaacc
ggcaagatcgcccgccaggccgatggcgccgtggtggccacctacggcgagaccgtagtg
ctcgccaccgtcgtcgcggcgaagacgccgcgcgaaggcgtcgacttcctgccgctcacc
gtcgactaccaggagaagacctacgccgcgggccgtattcccggcggctatttcaagcgc
gaaggccgtccgaccgagaaggagacgctggtctcccgtctgatcgaccgcccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtcctgtcgcac
gacatggagaacgatccggacatcgtgtcgctggtcgccgcctccgccgccctgacgctg
tcgggcgcgccgttcaagggcccgatcggcgccgcgcgcgtcggcttcgccaatgacgaa
tacgtgctcaacccgacgctcgacgagatgaccgagacccagctcgatctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtcgaatcggaagccaaggagctcaacgaagacgtg
atgctcggcgcggtcatgttcggccaccgccacttccagccggtcatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcaccacgatcgacaattccgag
atcgagaaggagatgcttggcattgccgagcaggatctccgcaaggcctacgcgatcccg
gtcaagcaggaacgctatgccgcggtcggcgccgtcaaggagaaggtgctggcgcacttc
ttcccggaaggccaggagccgaaatacgacaagctccgcgtcgccggcgtgttcaaggaa
ctggaagccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgt
gacgccaagaccgtgcgcaacatcatcgccgaggccggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgtggtgagacccaggcgatggtggtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtcggggacgtacaaggaaacgttcctgctgcac
tacaacttcccgccctactcggtcggtgaaaccggtcgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccgtacacgatccgcgtggtctccgagatcaccgagtcgaacggctcgtcctcg
atggcctcggtctgcggcgcctcgctgtcgctgatggatgccggcgtgccgttgaagcgg
ccgaccgccggtatcgccatgggcctgatcctcgaagatcagcgcttcgcggtgctgtcg
gacatcctcggcgacgaggatcatctcggcgacatggacttcaaggtcgccggcaccgac
cagggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggtggcgctcggccaggccaaggaaggacgcatccacatcctgggtgaaatgtccaag
gccctgaccgcggcgcgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
aacgatggcgaggcgatgaaggctgcgatcaagtggatcaagtcgatcgcctccgacccg
gaggtcggccagatctacgagggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggcgccaaggacggcctcgtccacattagccagctcgcggccagccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaggcggtcgaccaggagaccggcgaggac
ctcgaggccaagcagaagaccgacgccccggccccgcgcgaagctgccggcgagtaa
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