Bradyrhizobium quebecense: J4P68_0020100
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Entry
J4P68_0020100 CDS
T07890
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bqb
Bradyrhizobium quebecense
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bqb03016
]
J4P68_0020100 (truB)
Enzymes [BR:
bqb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4P68_0020100 (truB)
Transfer RNA biogenesis [BR:
bqb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4P68_0020100 (truB)
Prokaryotic type
J4P68_0020100 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UGY06898
LinkDB
All DBs
Position
complement(4210758..4211867)
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AA seq
369 aa
AA seq
DB search
MTVMTTNSVIDAKDADARDAERDAFAGPRTDDARRTNNDPRQKQGKQNQQPRRDKRDVHG
WVVLDKPIGMTSTQAVAVLKRLFQAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMDGR
KRYRFTVSWGEERDTDDTEGRPVRTSESRPTADSIRQLLPRFTGVIEQVPPQYSAIKVQG
ERAYDLARDGETVELKPRPVEIHELTLVEHGDNGQSVFEAECGKGTYVRALARDMGRILG
CFGHICALRRTLVGPFTERDMIPLEQLEALCNRAASGEGSLADALLPVETALDDIPALAV
TRADAARLHRGQAVLLRGRDAPNTSGTVYVTVAGRLLALAEIGNGELIPKRVFNLNGLTA
SPARNNESN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatgacgaccaacagcgtgatcgacgcgaaggatgccgacgcgcgcgacgct
gagcgggatgcttttgccgggccgcgcaccgacgatgcgcgccgcaccaacaacgacccg
cgccagaagcagggcaagcagaaccagcagccgcgccgcgacaagcgcgacgtccatggc
tgggtggtgctcgacaagccgatcggaatgacctcgacgcaggccgtggccgtgctcaag
cgcctgttccaggccaagcgcgccggccatgccggcacgctcgatccgctcgcctccggc
ggcctgccgatcgcgctgggcgaggccaccaagacggtgccgttcgtgatggacggccgc
aagcgctatcgcttcacggtcagctggggcgaggagcgcgacaccgacgacaccgaggga
cggccggtccgaaccagcgagagccggccgaccgccgattcgatccgccaattgctgccg
cgcttcaccggggtgatcgagcaggtcccgccgcaatattcggcgatcaaggtgcagggc
gagcgagcctatgatctggcacgcgacggcgagaccgtggagctgaagccccgcccggtc
gagattcacgaattaacccttgtggaacatggagataacggacaatccgtattcgaagcc
gagtgcggcaagggaacctatgtccgggccttggcccgcgatatgggccggattctgggc
tgtttcggccatatctgcgccctgcggcggaccctggtcggtccgtttaccgagcgggac
atgattccgctggaacagttggaggctttatgcaatagagccgcgtctggcgagggcagc
ctcgccgacgcgcttttgcccgttgagaccgcgctggacgacatcccggcactggccgtc
acacgggctgatgcggcaaggctccaccggggccaggccgttttgttgcgcggacgggat
gcgcccaataccagcggcacagtctatgtcacggtggcaggccgacttctcgcgcttgcc
gaaattggcaatggcgaactcatccccaagcgcgtgttcaacctgaacggactgactgcc
agtccggctcgcaacaatgaaagtaactga
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