Bradyrhizobium quebecense: J4P68_0022630
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Entry
J4P68_0022630 CDS
T07890
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bqb
Bradyrhizobium quebecense
Pathway
bqb00061
Fatty acid biosynthesis
bqb00071
Fatty acid degradation
bqb01100
Metabolic pathways
bqb01212
Fatty acid metabolism
bqb02024
Quorum sensing
bqb04146
Peroxisome
Module
bqb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bqb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J4P68_0022630 (pimA)
00071 Fatty acid degradation
J4P68_0022630 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J4P68_0022630 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4P68_0022630 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bqb01004
]
J4P68_0022630 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bqb04147
]
J4P68_0022630 (pimA)
Enzymes [BR:
bqb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J4P68_0022630 (pimA)
Lipid biosynthesis proteins [BR:
bqb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
J4P68_0022630 (pimA)
Exosome [BR:
bqb04147
]
Exosomal proteins
Exosomal proteins of breast milk
J4P68_0022630 (pimA)
Exosomal proteins of breast cancer cells
J4P68_0022630 (pimA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UGY00117
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All DBs
Position
4753720..4755408
Genome browser
AA seq
562 aa
AA seq
DB search
MTYPGEQYYPKGVQWSDEITRGTLPDQLSNAAAEFGARPVLGFRDRQISYSELEALVETA
AAAFMRAGYGKGTSVALFLGNSPDHPINFFGALKAGARVVHLSPLDGEIALSHKLSDSGA
RVLVTSNLSALLPTALKFLAKGLLDRLIVCEDDHWGKVGTPQTALPDNPAVITHRQFIDG
AVKPSQWPAVDVEDVALLQYTGGTTGLPKGAMLSHGNLTAAVSIYDVWGKPGRLERNAIE
RVICVLPLFHIYALTVVLLSAIRRGHLISLHQRFDVEAVMRDIEVKRATVFPGVPTMWIA
IASLPDLDKRDLSSLVVAGSGGAPLPVEVAKIFERRVGMKLKSGWGMTETCSPGTGHPKE
GPEKPGSIGLMLPGIEMDVVSLEDSTKLMPVGEVGEIRIRGPNVTKGYWNRPAETAEAFV
GDRFLTGDIGYMDADGYFYLVDRKKDMIISGGFNVYPQMIEQAIYTHPAVQEVIVIGIPD
DYRGEAAKAFIKLRDGEKVFSVDELRAFLAGKVGKHELPAAVEFVDELPRTPVGKLSRHE
LRQQQPKTSPSKPQQTASGSRS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcccggcgaacaatattatcccaagggcgtgcagtggagcgacgagatcacg
cgcggcacgctgccggaccagctctcgaatgccgccgctgagttcggcgcgcgtccggtg
cttggattccgcgaccggcagatcagctacagcgagctcgaggcgctggtcgagaccgcg
gctgccgccttcatgcgtgccggttacggcaagggcacctcggtcgcgctgtttctcggc
aactcgccggatcatccgatcaacttcttcggcgcgctgaaggccggtgcccgcgtcgtg
catctgtcgccgctcgacggcgagatcgcgctgtcgcacaagctgtccgattcaggcgcg
cgggtgctggtcaccagcaatctctcggcgctgttgccgaccgcgctgaaattcctcgcc
aaggggctgctcgaccgtctgatcgtttgcgaggatgatcattggggcaaggtcggcacg
ccgcagaccgcgttgccggacaatccagctgttatcacgcaccgccagttcattgacggt
gcagtcaagccgtcgcaatggcccgcggtcgatgtcgaggacgtcgcgttgctgcaatat
accggcggcaccaccggcctgcccaagggggcgatgctcagccacggcaatctcaccgcg
gcggtgtcgatctatgatgtctggggcaagccggggcggctcgaacgcaatgcgatcgag
cgcgtcatctgcgtgctgccgctgtttcatatctatgcgctgaccgtcgtgctgctgtcg
gcgatccggcgcggccatctgatctcgctgcatcagcgcttcgacgtcgaggccgtgatg
cgcgacatcgaggtcaagcgcgcgacggtgtttcccggcgtgccgacgatgtggatcgcg
atcgcctcgcttccggacctcgacaagcgcgatctctcctcgctggtggtcgcgggctcc
ggcggcgctccgctgccggtcgaggtcgccaagatcttcgagcgccgcgtcggcatgaag
ctgaagagcggctggggcatgaccgaaacctgttcgcccggcaccggccatcccaaggaa
ggaccggagaagccgggctcgatcgggctgatgctgcccggcatcgagatggacgtggtg
tcgctagaggattccaccaagctgatgccggtcggcgaggtcggcgaaatccgcatccgc
ggcccgaacgtcaccaaaggttactggaacaggccggcggagaccgcggaggccttcgtc
ggcgaccgcttcctgaccggcgatatcggctacatggatgccgacggctatttctatctg
gtcgaccgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatgatc
gagcaggcgatctacacgcatcccgccgtgcaggaagtgatcgtgatcggcattcccgac
gactaccgcggcgaggcggcaaaggccttcatcaagctgcgcgacggcgagaaagtgttc
tcggtcgacgagctgcgcgcattcctcgccggcaaggtcggcaagcatgaattgccggcg
gcggtcgagttcgtcgacgagctgccgcgcaccccggtcggcaagctgtcgcgtcacgaa
ttgcggcagcagcagcccaagacatctccatccaaaccacaacaaaccgcatcaggatcg
cgctcatga
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