Bradyrhizobium quebecense: J4P68_0039445
Help
Entry
J4P68_0039445 CDS
T07890
Name
(GenBank) HAMP domain-containing protein
Organism
bqb
Bradyrhizobium quebecense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
OKR_DC_1_N
OmpH
RNase_Y_N
YscO-like
DUF3450
ATG14
FBF1
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
UGY07338
LinkDB
All DBs
Position
8396215..8402397
Genome browser
AA seq
2060 aa
AA seq
DB search
MRGGDFSVRMRGDYLGIDGKIADAFNEIAAANERMAQQLARVGQVVGREGQTRQRVNFGL
ASGAWADMESSVNTLIDDLLWPTREVTRAVAAVAQGDLLQTVQLDVEGRPLRGEFLQSAN
IVNTMIKQLSVFTSEVTRVAREVGTEGKLGGQAQVPEVTGVWKDLTESVNSMANNLTGQV
RNIAEVTIAVANGDLSKKITVDVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGK
LGGQAIVPGVAGTWKDLTDSVNAMCGNLTAQVRNIANVTTAVARGDLSRKITVDVSGEIL
ELKDTINTMVDQLNSFASEVTRVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNL
TAQVRNIADVATAIAGGDLSKKITVNVSGEILQLKETLNTMVDQLNAFASEVTRVAREVG
TEGKLGGQANVLGVAGTWKDLTDNVNFMASNLTAQVRNIAGVTTAVANGDLSKKITVDVR
GEILELKDTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDSVNSM
ASNLTAQVRNIAEVATAVAKGDLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVA
REVGTDGKLGGQAEVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKIT
VDVRGEILQLKETLNTMVDQLNRFAGEVTRVAREVGTDGSLGGQANVPGVAGTWKDLTDS
VNSMAGNLTAQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNGFAGEV
TRVAREVGTEGKLGGQAEVPGVAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLS
KKITVDVRGEILLLKDTLNTMVEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKD
LTDNVNLLAANLTTQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAF
AGEVTRVAREVGTEGKLGGQAEVRGVAGTWKDLTDTVNVMAANLTEQVRGIVKVVTAVAN
GDLKQNLTVKSKGEVAALADTINNMTETLATFAEQVTSVAREVGVEGRLGGQANVPGTEG
TWKDLTGNVNLLAANLTSQVRAIAEVATAVTKGDLTRSIQVDVRGEVAELKDNINTMIGN
LRLTTERNTEQDWLKTNLARFTNMLQGQRDLATVGRLLLTELAPLINAHMGVIYQVDNPE
NAQLRLLSAYASDSSNPHPQIVQFGEGLIGQCALDKRQRLVSDIPGDAVPINSALMRIMP
KNLVVFPVLFENQVKAVIELSSISSFTTSQITFLEQLTDSIGIVLNSIEATMQTEALLKQ
SQQLAGELQTQQKELQQTNDQLEQKAQQLAERNVDVERKNQEIEQARRALEEKATELSLT
SKYKSEFLANMSHELRTPLNSILILGQQLTENPDGNLTSKQVEFARTIHGAGTDLLNLIS
DILDLSKIESGTVTVDAEEILTSSLLETVGRPFRHEAENRHLSFSIDVDANLARSMVTDS
KRLQQVLKNLLSNAFKFTAEGGVSLTVSAALGGWSAEHPILNAAPAVVAFEVSDTGIGIP
QDKQKLIFEAFQQADAGTSRKYGGTGLGLAISRELAGLLGGEIHLRSAPSKGSTFTLYLP
LKYAGPSVALRPPAQPLAMPHTAAPSLQSSGTQERVIEQLPDDRLDLEPGDTILLIVEDD
PHYARVLIDLARDKGFKVLVASRGAEALDLAKQFQPSAVSLDVFLPDMLGWTVLSQLKHN
PLTRHIPVQVITLDEDRQHALARGAFSFVNKPTTTEGVSAALSQIKEYARPRRKRLLIVE
DNAAEQLSITELLGHEDIEIVTSGTGAGALSTLREHPCDCVVLDLRLPDMSGFEVLDQIR
KDETLSRIPVVVFTGRELSAEEDAELHTMARSIVVKGVESPERLLDETSLFLHRVITELP
VEKQRMLEKLNSSDEDLIGKTALLVDDDARNIFALSSVLERRGMKVLTATTGHEAISLVE
SNPKIAIVLMDIMMPQMDGYQTIGAIRQNPAFARLPIIALTAKAMKGDREKCLEAGASDY
LAKPVNTEQLLLAIRMWLHR
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtggcgacttctcggttcggatgcgtggcgactatctcggtatcgacggcaag
atcgcggacgccttcaacgaaatcgcagccgccaacgagcgcatggcgcagcaattggcg
cgcgtcggacaggtcgtcggccgtgaggggcagacccgccagcgcgtcaatttcggcctc
gccagtggcgcctgggccgacatggaaagctcggtcaacaccctgatcgatgatttgctg
tggccgacccgcgaggtcacccgcgcggtcgccgcggtggcgcagggcgacctgctgcag
accgtgcagctcgacgtcgagggcaggccgctgcgcggcgaattcctgcagtcggcgaac
atcgtcaacacgatgatcaagcagctctcggtgtttacctccgaggtcacgcgcgtggcc
cgcgaagtcggtaccgagggcaagctcggcggccaggcccaggtgccggaagtgaccggc
gtctggaaggacctgaccgagagcgtcaactcgatggccaacaacctgaccggccaggtc
cgcaacatcgccgaggtgacgatcgcggtcgccaacggcgacttgtccaagaagatcacg
gtcgacgtgcgcggcgagatcctgcagctgaaggaggccatcaacacgatggtcgatcag
ctgcggtcattcgcctcggaagtgacgcgcgtggcgcgcgaggtcggtaccgacggcaag
ctcggcggccaggcgatcgtgcccggcgttgccggcacctggaaggacctcaccgactcg
gtgaacgcgatgtgcggcaacctgaccgcccaggtccgcaacatcgccaacgtgaccacg
gccgtggcgcgcggtgacctgtcgcgcaagatcacggtcgacgtcagcggcgagatcctc
gagttgaaggacaccatcaacacgatggtggaccagctcaactcgtttgcgtcggaagtg
acgcgcgtggcgcgcgaagtcggcaccgaaggcaaactcggcggccaggcccaggtgccc
ggcgtcgccggcacctggaaggacctcaccgacaacgtcaacttcatggcgtcgaacctg
accgcccaggtccgcaacatcgccgacgtcgcgaccgcgatcgccggcggcgacctgtcg
aagaagatcacggtgaacgtatcgggcgagatccttcagctgaaggaaacgctgaacacg
atggtcgaccagctcaatgcgtttgcgtcggaagtgacgcgcgtggcgcgcgaggtcggc
accgaaggcaagctcggcggccaggccaacgtgctcggcgtcgccggaacctggaaggac
ctgaccgacaacgtcaacttcatggcgtcgaacctgaccgcgcaggtccgcaatatcgcc
ggcgtcaccaccgcggtcgccaacggcgacctctcgaagaagatcacggtggacgtgcgc
ggtgaaatcctcgagctgaaggacaccatcaacacgatggtggaccagctcaacgccttc
gctggcgaggtgacgcgcgtggcgcgcgaggtcggcaccgagggcaagctcggcggccag
gccgaggtgcgcggcgtcgcgggcacctggaaggatttgaccgacagcgtcaactcgatg
gcctcgaacctgacggcacaagtccgcaacatcgccgaggtcgcgaccgcggtggcgaag
ggcgacctgtcgaagaagatcaccgtgaacgtgtcgggcgaaatccttcagctgaaggaa
acgctcaacacgatggtcgaccagctcaacgccttcgccggcgaagtgacgcgcgtggcg
cgcgaggtcggcaccgacggcaagctcggcggccaggccgaggtgcccggcgtcgccggc
acctggaaggatttgaccgatagcgtcaactcgatggccggcaacctgacggcgcaggtc
cgcaacatcgcggaagtcgcgaccgcgatcgccggcggcgacctgtcgcgcaagatcacg
gtcgacgtccgcggcgaaatccttcagctgaaggaaacgctcaacacgatggtcgaccag
ctcaaccgcttcgcgggcgaggtgacgcgcgtggcgcgcgaggtcggcaccgacggcagc
ctcggcggccaggccaacgtgcccggcgtcgccggcacctggaaggacctcaccgacagc
gtcaactcgatggccggcaatctgacggcgcaggtccgcaacatcgccgaagtgacgacc
gccgtggcgcgcggcgacctgtcgcgcaagatcacggtcgacgtgaagggggaaatcctc
gagctgaagaacaccatcaacacgatggtcgaccagctcaacggcttcgccggcgaggtg
acgcgcgtggcgcgcgaggtcggcaccgaaggcaagctcggcggccaggccgaagtgccc
ggcgtcgccggcacgtggaaggacctcaccgacaacgtcaacttcatggcgtcgaatctc
acggcgcaggtccgcaacatcgccgaggtcgcgaccgcgatcgccggcggcgatctgtcg
aagaagatcacggtggacgtgcgcggcgaaatcctgctgctcaaggacaccttgaacacg
atggtcgagcagctgcgctcgttcgccgccgaagtgacgcgcgtggcgcgcgaggtcggc
accgagggacggctgggcggccaggccgtggtgcccggcgtcggcggtacctggaaggac
ctcaccgacaacgtcaacctcttggccgcgaacctgaccacgcaggtccgcaacatcgcc
gaagtgacgaccgccgtggcgcgcggcgacctgtcgcgcaagatcacggtcgacgtgaag
ggggaaatcctcgagctgaagaacaccatcaacacgatggtggaccagctcaacgccttc
gccggcgaggtgacgcgcgtcgcgcgcgaggtcggcaccgagggcaagctgggcggtcag
gccgaggtgcgcggcgttgccggcacctggaaggacctcaccgacaccgtcaatgtcatg
gcggcgaacctgaccgagcaagtgcgcggcatcgtcaaggtggtgaccgccgtcgccaat
ggcgacctgaagcagaacctgacggtgaagtcgaagggcgaggtggcagcgctcgctgac
acgatcaacaacatgacggagacgcttgcgaccttcgccgaacaggtgaccagcgtggcg
cgcgaggtcggcgtcgagggacggctcggcggtcaggccaacgtgcccggcaccgaaggc
acctggaaggacttgaccggcaacgtcaacctgctggcagccaacctgacctcccaggtg
cgcgcgatcgccgaagtggcgaccgccgtgaccaagggcgacctgacgcgctcgatccag
gtcgatgtgcgcggcgaagtcgcggagctcaaggacaacatcaacacgatgatcggtaac
ctccgtctcacgacggagcgcaacaccgagcaggactggctgaagaccaatctggcgcgc
ttcaccaacatgctgcagggccagcgcgatcttgcgaccgtcggccgcctgctgctgacc
gagctggcgccgctgatcaacgcgcatatgggcgtgatctaccaggtcgacaatcccgag
aatgcgcagctgcgcttgctgtcggcctatgccagcgacagcagcaatccgcatccgcag
atcgtgcagttcggcgagggactgatcggccagtgcgcactcgacaagcgccagcgcctc
gtctccgatatccccggcgatgcggtgccgatcaattcggcgctgatgcggatcatgccg
aagaacctcgtcgtattcccggtgctgttcgagaaccaggtcaaggcggtgatcgagctg
tcctcgatctcgtcgttcacgacatcgcagatcaccttcctcgaacagctgaccgacagc
atcggcatcgtgctcaacagtatcgaggcgacgatgcagaccgaggcgctgctcaagcag
tcgcagcagctcgccggcgaattgcagacccagcagaaggagttgcagcagaccaacgac
cagctcgagcagaaggcccagcagcttgccgaacgcaatgtcgacgtcgagcgcaagaat
caggaaatcgagcaggcccgccgcgcgctggaagagaaggcgaccgagctgtcgctgacc
tcgaagtacaagtccgaattcctcgccaacatgtcgcacgagctgcgcacgccgctgaac
tcgatcctgatcctgggccagcagctcaccgagaatccggacggcaatttgactagcaag
caggtcgagttcgcccgcaccattcatggcgccggcaccgacctgctgaacctgatcagc
gatatccttgatctgtccaagatcgagtccggcacggtgacggtcgatgccgaggaaatc
ctcacctcgagcctgctggagacggtcgggcggccgttccggcacgaggcggagaaccgg
catctctccttcagcatcgatgtcgacgccaaccttgcgcgcagcatggtgacggactcc
aagcggctgcaacaggtgctgaagaatctgctgtcgaacgcattcaagttcaccgcggag
ggcggcgtcagcctgaccgtgtcggctgcactcggcggctggagcgccgagcatccgatc
ctgaacgccgcaccagccgtggtcgcattcgaagtgtcggataccggcatcggcattcct
caggacaaacagaagctgatcttcgaggcgttccagcaggccgacgccggcaccagccgt
aaatatggcggcacgggccttggccttgccatcagccgtgagctggccggactgctcggc
ggcgagatccatctgcgaagcgcaccgagcaagggttcgactttcacgctctatttgccg
ctgaaatatgccggaccgtcggtcgccttgcgcccaccggcgcagccgctggcgatgccg
cacacggcggcgccttcgctgcaatcgtccggcacacaggaacgtgtgatcgagcagctg
ccggacgaccggctcgatctcgagcccggcgacacgatcctcttgatcgtcgaggacgac
ccgcattacgcgcgggtgctgatcgatctggcgcgggacaagggcttcaaagttctggtc
gcaagccgcggcgccgaggcgctggatctcgccaagcagttccagccaagcgcggtttcg
ctcgacgtcttcctgcccgacatgctgggctggacggtgctgagccagctcaagcacaat
ccgctgactcgtcacattccagtccaggtcattacgctcgacgaggaccggcaacatgcg
ctggcgcgcggcgccttctccttcgtcaacaagccgactacgaccgagggcgtcagcgcg
gcgctatcgcagatcaaggaatacgccagaccgcgtcgcaagcgcctgctgatcgtggag
gacaatgcggcggagcagctcagcatcaccgagttgctcggccacgaggatatcgagatc
gtgaccagcggaaccggggcgggggcgctctcaacgttgcgcgagcatccgtgcgactgt
gtcgtgctcgatctgcgcctgcccgatatgagcggcttcgaggtgctggatcaaatccgc
aaggacgagacgctctccagaatacccgttgtcgtgtttaccggccgggaactttcggcc
gaagaggacgcggaactgcacacgatggcgcgcagcatcgtcgtcaaaggtgtggagtcg
ccggaacgcctgctcgacgaaacgtcactgttcctgcaccgtgtgatcacggaattgcct
gtcgaaaaacagaggatgctggagaagctcaatagttccgatgaggatcttattggcaag
accgcgctcctggtcgacgacgacgcccgcaacatcttcgcgctgtcgagcgtgctggag
cggcgaggtatgaaggtgttgactgcgacaaccggtcacgaggcgatctcgctggtcgag
tccaatccgaagatcgcgatcgtgctgatggacatcatgatgccgcagatggacggttac
cagaccatcggcgccatccggcaaaatcccgcctttgcgcggctgccgatcatcgcgctg
accgcgaaggcgatgaagggtgaccgggagaaatgcctggaggcaggcgcatccgattat
ctggcgaaacccgtgaacaccgagcaattgctgctggcgatccgcatgtggctgcaccgc
tga
DBGET
integrated database retrieval system
