Bacillus amyloliquefaciens LL3: LL3_00611
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Entry
LL3_00611 CDS
T01835
Symbol
xpf1
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bql
Bacillus amyloliquefaciens LL3
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bql03021
]
LL3_00611 (xpf1)
Transcription machinery [BR:
bql03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LL3_00611 (xpf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
UPF0122
HTH_17
HTH_23
HTH_38
HTH_68
DUF134
HTH_Tnp_ISL3
Sigma70_ECF
HTH_40
Phage_antitermQ
MarR_2
HTH_10
HTH_24
HTH_36
HTH_Crp_2
L_biotic_typeA
Motif
Other DBs
NCBI-ProteinID:
AEB62158
LinkDB
All DBs
Position
577617..578132
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AA seq
171 aa
AA seq
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MQDLIIEYKRALRESRKMYRLYKDTAEVNLTAEQINDKKIISSMISDIEFTLEWLQNGRQ
PGARRGADRRDAYQRTILADPRLIDALPEEYAIVQEAEGEVSDWDKERIADALSVLTERE
KDIFMMHAVQNMSFEEIAQILGIKKGTVQKNIERSRLKMKNRADHSLFCLA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttaatcattgaatacaaacgagctttaagagaatcaagaaaaatgtatcgg
ctctacaaagatacggctgaagtcaatctgacggctgaacagattaacgacaaaaagatt
atcagtagcatgatcagcgatattgaattcactcttgaatggctgcagaacggaagacag
ccgggcgcccgccgaggtgctgacagaagagacgcatatcaaaggacgattcttgctgat
ccgcgcttaattgatgcgctgccggaagaatatgcaatcgttcaagaggctgagggagag
gtaagtgattgggataaggaaagaatcgctgatgccctatccgtgcttaccgaaagagaa
aaagacattttcatgatgcacgctgtgcaaaacatgtcattcgaagagatagcgcagata
ttggggattaaaaaaggaaccgtgcagaagaacatcgaacgttcccgcctgaaaatgaaa
aatagagcagatcacagcctattctgtttagcgtga
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