Bacillus amyloliquefaciens LL3: LL3_01018
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Entry
LL3_01018 CDS
T01835
Symbol
lytF
Name
(GenBank) D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
bql
Bacillus amyloliquefaciens LL3
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bql01002
]
LL3_01018 (lytF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bql01011
]
LL3_01018 (lytF)
Peptidases and inhibitors [BR:
bql01002
]
Cysteine peptidases
Family C40
LL3_01018 (lytF)
Peptidoglycan biosynthesis and degradation proteins [BR:
bql01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
LL3_01018 (lytF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
AEB62560
LinkDB
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Position
complement(972036..973487)
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AA seq
483 aa
AA seq
DB search
MKKKLAVGLTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQTYNTSVDAITSANHLKSS
VLSIGQTLTIPNGKSDSGSSSSPSKNSGTSKGVYTVKSGDSLWLIASDFKMSVQELKKLN
GLTSDLIRAGQKLQVTGKVSSSTDQTKTVPGSSSNSSKNQSSSSGTYKVKLGDSLWKIAN
SVHMTIAELKVLNNLKTDTIYVNQVLKTKGTSSSGSTPPKDNSNQNQNQTQTSSYTVKSG
DSLWKIANAYNMTVQQIRSINKLTSDMLRVGQVLKLTKTSSSGSSSPSTPNQSGDKGKTT
TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLHIGQKLTITGQQTNPTPNQSGGTGG
TGSTSAKINVMIDAAKAQLGVPYVWGGTTPRGFDCSGFIYYVLNKVTSVSRLSAAGYWNT
MTSVSQPAVGDFVFFSTYKAGPSHVGIYLGNGQFINANDSGVVISSMNNSYWKQRYLGAK
RFF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaagttagcggtcggtttgactgcatctgcgattgtcgggtctgcattagct
gtaacaccggcagaagcacaaacgattaaggtcaaaagcggagattcattatggaagctt
gcccaaacctataatacaagcgtggatgccattacatcagcgaatcatttaaaatccagc
gtgctttccatcgggcagacgctcaccatccctaacggcaaatcagattccggaagctca
tcgtcaccttcaaagaacagcggcacatctaaaggtgtgtatacggttaaaagcggagac
tcgctctggctgatcgcatctgattttaaaatgtccgtgcaggaactgaaaaaactgaac
ggtctgacaagcgacttaatccgcgcgggacagaagctgcaagtgacagggaaagtttcc
tcaagcaccgatcagacaaaaaccgtgccgggcagcagctcaaacagcagcaaaaatcag
tcatcatcttccgggacatataaagtcaaactcggcgattcactatggaagatcgcaaac
agcgtccatatgaccattgcggaactcaaagttttaaacaacttaaaaacggatacgatc
tacgtcaaccaagtcttgaaaacaaaaggaacgtcttcttcgggaagtacgccgccaaag
gacaattcaaaccaaaatcaaaaccagacgcaaacgtcctcttacacagtaaaaagcggc
gattcgctctggaaaatcgcaaacgcatacaatatgacggttcagcaaatcagaagtatc
aataaactgacgtcagacatgctgcgggtcggacaagtgcttaagctgacaaaaacgtca
tcttccggctcttcgtctccgtcaactccgaaccaatccggagataaagggaaaaccact
acatataccgtgaaaagcggggattctttatgggtgatcgcccaaaaattcaatgtaacc
gcccagcagatccgtgagaaaaacaatctgaaaacagatgtgcttcatatcggacagaag
ctgacgattaccggacagcagacaaacccaacaccgaatcagtccggcggaacaggcggc
acaggttcaacaagcgcgaagattaatgtaatgatcgatgccgcaaaagctcaactgggc
gtaccgtatgtatggggcgggacaacgccgagaggctttgactgcagcggttttatttat
tacgttctcaataaggtcacttccgtatccagactttcagccgcaggctactggaatacg
atgacatcagtaagccagccggcggtcggtgactttgtctttttctcaacttataaagcc
ggcccttcccacgtcggcatttatctcggaaacggacagtttatcaatgccaacgattca
ggtgtcgtcatttccagcatgaacaattcctattggaaacagcgctacctcggagcgaaa
cgcttcttctga
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