Bacillus amyloliquefaciens LL3: LL3_01567
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Entry
LL3_01567 CDS
T01835
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase E3 subunit of both pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bql
Bacillus amyloliquefaciens LL3
Pathway
bql00010
Glycolysis / Gluconeogenesis
bql00020
Citrate cycle (TCA cycle)
bql00260
Glycine, serine and threonine metabolism
bql00280
Valine, leucine and isoleucine degradation
bql00310
Lysine degradation
bql00380
Tryptophan metabolism
bql00620
Pyruvate metabolism
bql00630
Glyoxylate and dicarboxylate metabolism
bql00640
Propanoate metabolism
bql00670
One carbon pool by folate
bql00785
Lipoic acid metabolism
bql01100
Metabolic pathways
bql01110
Biosynthesis of secondary metabolites
bql01120
Microbial metabolism in diverse environments
bql01200
Carbon metabolism
bql01210
2-Oxocarboxylic acid metabolism
bql01240
Biosynthesis of cofactors
Module
bql_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bql_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bql_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bql_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LL3_01567 (pdhD)
00020 Citrate cycle (TCA cycle)
LL3_01567 (pdhD)
00620 Pyruvate metabolism
LL3_01567 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
LL3_01567 (pdhD)
00640 Propanoate metabolism
LL3_01567 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LL3_01567 (pdhD)
00280 Valine, leucine and isoleucine degradation
LL3_01567 (pdhD)
00310 Lysine degradation
LL3_01567 (pdhD)
00380 Tryptophan metabolism
LL3_01567 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LL3_01567 (pdhD)
00670 One carbon pool by folate
LL3_01567 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bql04147
]
LL3_01567 (pdhD)
Enzymes [BR:
bql01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LL3_01567 (pdhD)
Exosome [BR:
bql04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LL3_01567 (pdhD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
Amino_oxidase
NAD_binding_9
AlaDh_PNT_C
DAO
Tox-PAAR-like
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
Thi4
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AEB63108
LinkDB
All DBs
Position
1453840..1455252
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AA seq
470 aa
AA seq
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MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
ggaactcttggtggcgtttgtctgaacgtcggctgtattccttcaaaagcgcttatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaaaagttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttact
ggcggtgttgcaggtcttttaaaaggaaataaagtcgaagttgtaaaaggcgaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatatacattt
aaaaacgcgatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcactggcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatacatcggtactgagcttggaacagcgtatgcaaactttggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctcttgttacccgcagactgaagaaaaaaggcaacgttgaaattcatacaagcgctatg
gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggtcttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctattgcaggagag
cctgctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgctgccaaa
ttcccgtttgcagcaaacggacgcgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagatggtcttgtgatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcacaatggaagctgccgaagta
gcaatcggaagcccgatccacatcgtaaaataa
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