Bacillus amyloliquefaciens LL3: LL3_01807
Help
Entry
LL3_01807 CDS
T01835
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
bql
Bacillus amyloliquefaciens LL3
Pathway
bql02020
Two-component system
bql02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LL3_01807 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LL3_01807 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bql03021
]
LL3_01807 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bql02035
]
LL3_01807 (sigD)
Transcription machinery [BR:
bql03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LL3_01807 (sigD)
Bacterial motility proteins [BR:
bql02035
]
Flagellar system
Flagellar assembly proteins
Stator
LL3_01807 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
UPF0122
IF2_N
UPF0175
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AEB63347
LinkDB
All DBs
Position
1677869..1678633
Genome browser
AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWSRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVTPSEIAEELGMTEQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAGKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKHLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctgtggtcgcgctggaaagagtggaaagat
cctaaagccggtgatgatttaatgcgccgttacatgccgctggtcacatatcatgtcggc
agaatttccgtcggactgccgaaatcggtgcataaagacgatctaatgagccttggtatg
ctcggtttatacgatgccctagaaaaattcgaccccggccgggatttaaagtttgatacc
tatgcctcgtttagaattcgcggtgcaatcatcgacgggctgcgtaaagaagattggctg
cccagaacttcacgggagaagacaaaaaaagtcgaagcggcgatcgaaaaacttgaacag
cgctacctacggaatgtgacgccttcagagatcgccgaagagctggggatgacggagcag
gacgtagtatcaacgatgaatgaaggcttttttgccaatctcttatcaattgatgaaaag
cttcacgaccaggatgacggtgagaatattcaagtgatgatcagagatgacaaaaatgtg
ccgccggaagaaaaaattatgaaggacgagctgatcgcccagcttgcaggcaaaatccac
gagctttctgaaaaagaacagcttgtcgtcagtttattttataaagaagaactgactctg
accgaaatcggacaagtcctgaacctttcgacctcacggatttcgcagattcattcaaag
gcgctgtttaaattaaagcatctgcttgaaaaagtaattcaataa
DBGET
integrated database retrieval system
