Bacillus amyloliquefaciens LL3: LL3_01860
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Entry
LL3_01860 CDS
T01835
Symbol
ymcB
Name
(GenBank) putative AdoMet radical enzyme for tRNA modification
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bql
Bacillus amyloliquefaciens LL3
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bql03016
]
LL3_01860 (ymcB)
Enzymes [BR:
bql01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LL3_01860 (ymcB)
Transfer RNA biogenesis [BR:
bql03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LL3_01860 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
AEB63400
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All DBs
Position
1737661..1739190
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AA seq
509 aa
AA seq
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MNEKQKQESGQVNPADKKSEKDYSKYFEAVYIPPSLKDAKKRGKESVQYHNDFKISEEFK
GLGEGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEATNSVDDANVILLNTCAIRENAENK
VFGELGHLKALKKNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHNIHRLPELLS
EAYLSKEMVIEVWSKEGDVIENLPKVRNGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSR
RPEEIIQEVRRLASEGYKEITLLGQNVNAYGKDFEDITYGLGDLMDELRKIDIPRIRFTT
SHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMP
NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK
KERLQRLNDLVKEISAKKMKEYEGRTVEVLVEGESKNNPDILAGYTEKSKLVNFKGPKDA
IGKIVRVKIEQAKTWSLDGVMAGEAIEVK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagcaaaagcaggaaagcggacaagtaaatccagcggacaaaaaatccgaa
aaggattacagcaagtatttcgaagccgtatatattccgccttcattaaaagatgcgaaa
aaacggggcaaagaatccgttcaatatcataacgattttaaaatctcagaagaatttaaa
ggcctcggggaaggcaggaagttttatatccgcacttacggatgtcagatgaatgagcat
gatacggaagtcatggcaggtatttttatggcgcttggatatgaagcgacaaattcagtt
gatgatgcgaatgtcattttattaaacacctgcgccatccgggaaaatgctgaaaacaaa
gtgttcggcgaactcggccatttaaaagcgctcaaaaaaaataacccggacctgattctg
ggcgtatgcggctgtatgtcacaagaagaatcagtcgtaaaccgcatccttaagaagcac
ccgtttgtcgatatgattttcggcacgcacaacattcaccgtctgccggaactgttatca
gaggcatacttatcaaaagagatggtgattgaagtgtggtcgaaggaaggggatgtcatt
gaaaaccttccgaaggtccgcaacggcaaaattaagggctgggtcaacatcatgtacggc
tgtgataaattctgcacatactgcatcgtgccgtatacccgcggaaaagaacgaagccgc
cgtcctgaagaaattatccaggaagtcagaagacttgcaagcgaaggttataaagaaatc
acgctgctcggtcaaaacgttaatgcgtacggaaaagattttgaggacataacgtacgga
ctcggtgatttaatggacgaactgcgtaaaattgatattccgagaatccgtttcacgaca
agccatccgcgtgactttgatgaccatctgatcgaagtgctcgccaaaggcggcaacctg
cttgaccatatccatcttccggttcaatcaggaagctcggccatgttaaaaatgatggcg
cgcaaatatgacagagaacgctatctggagcttgtcggaaaaattaaagcggcgatgccg
aacgcttcactcactaccgatatcattgtcggtttcccgaatgaaaccgatgaacagttt
gaggaaaccctttctttatatcgtgaagtggaatttgacagcgcgtatacgtttatttac
tctcctcgtgaaggcacgcctgcggcgaagatgaaagacaacgttccgatgagggtcaag
aaagaacgtcttcagcgcctcaatgatttggtgaaagaaatttccgccaaaaaaatgaag
gaatatgaaggccggactgtcgaagtattagttgagggagaaagcaaaaataaccctgac
attcttgccggctatacggaaaaaagcaagctcgtcaacttcaaagggccgaaagacgcc
atcggcaagattgtacgcgtcaaaatcgaacaggcgaaaacatggtcgcttgacggtgtg
atggcaggagaagcaatcgaggtgaaataa
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