Bacillus amyloliquefaciens LL3: LL3_02709
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Entry
LL3_02709 CDS
T01835
Symbol
cshB
Name
(GenBank) DEAD-box RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bql
Bacillus amyloliquefaciens LL3
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bql03019
]
LL3_02709 (cshB)
03009 Ribosome biogenesis [BR:
bql03009
]
LL3_02709 (cshB)
Enzymes [BR:
bql01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LL3_02709 (cshB)
Messenger RNA biogenesis [BR:
bql03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL3_02709 (cshB)
Ribosome biogenesis [BR:
bql03009
]
Prokaryotic type
rRNA helicases
LL3_02709 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEB64242
LinkDB
All DBs
Position
complement(2541733..2543076)
Genome browser
AA seq
447 aa
AA seq
DB search
MCRFKELGKMKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTG
TGKTHAYLLPILNRIDPGSDTVQAVITAPTRELANQIYQEALKITQGAEDEQIRTKCFIG
GTDKQKSIDKLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDLGFLEDVD
YIGSRMPEELQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRD
KDKLLFDMMSNLNPYLGIVFANTKNTADHIAKYLTEKGMRIGLLHGGLTPRERKKVMKQI
NDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYEL
SDEDALVRLEKMGIEFAYAELVNGEWKKGDDRHRRKKRKKTENEADQIAKRLVKKPKKVK
PGYKKKMSYEMEKIRRKQRRNQSNKGK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgctttaaggagctgggaaaaatgaaagaaactaaatttgatggatacaactta
aaaccgtttattatagatgcagttcaccgccttggtttttatgaaccgacagatattcaa
aagaggctgatacctgctgtattgaaaaacgaaagcgtcatcgggcagtcccaaacggga
acgggaaaaacccacgcctatttattgcctatcctgaatcggattgatccgggttctgat
acggtacaggctgttatcacagcgccgacgagagagcttgccaatcagatttatcaggaa
gcgcttaaaatcacacagggtgcagaagacgagcagatccggacaaaatgctttatcggc
ggaacggacaagcaaaaatcgattgataagctgaaaacacagcctcatctcgtcgtcgga
actccgggccggattgcggatctgattaaggcgcaggcattgaacgtctataaagcgcag
tctctcgtcattgacgaagctgatctgatgcttgatttggggtttttggaagacgttgat
tacatcgggtcgcgtatgccggaagaacttcagatgcttgttttctcagctacgattccg
gaaaagctgaagccgtttttgaaaaagtatatggaaaatccgaaatacgcgcatgttgag
ccgaaaagaatcacagccgaaaagattgaacatgttttggttccttctaaacagcgtgat
aaagacaagctgctttttgatatgatgtctaatctgaatccgtatttgggcattgtgttt
gcaaatacgaaaaacactgctgaccatattgcgaaatacctgactgaaaaaggcatgaga
atcggccttctgcacgggggattaacgccgcgtgagcgtaaaaaggtaatgaagcagatt
aatgatctggagttcacttatgtcattgcgacagaccttgcggcaagaggaattgacatt
aaaggcgtaagccatgtcatcaactacgagcttccggacgatctggatttttatgttcac
cgcgtaggaagaacagcgcgcgccggctcatcaggccaagcactgaccatttatgagctt
tctgacgaagatgcgctcgtaagactcgagaagatgggcattgagtttgcttatgcggag
cttgtaaacggagaatggaaaaaaggcgatgaccgccaccgccgcaagaaacgtaaaaag
acggaaaatgaggcagaccaaattgcgaagcgccttgtgaaaaagccgaaaaaagtaaaa
ccgggctataaaaagaaaatgagctatgaaatggaaaaaatcagaagaaaacagagaaga
aaccaatctaacaaagggaagtag
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