Bacillus amyloliquefaciens LL3: LL3_03988
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Entry
LL3_03988 CDS
T01835
Symbol
ywbD
Name
(GenBank) putative AdoMet-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
bql
Bacillus amyloliquefaciens LL3
Brite
KEGG Orthology (KO) [BR:
bql00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bql03009
]
LL3_03988 (ywbD)
Enzymes [BR:
bql01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
LL3_03988 (ywbD)
Ribosome biogenesis [BR:
bql03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LL3_03988 (ywbD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
TRM5-TYW2_MTfase
SH3_2
MTS
Motif
Other DBs
NCBI-ProteinID:
AEB65513
LinkDB
All DBs
Position
complement(3737209..3738396)
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AA seq
395 aa
AA seq
DB search
MKLLTVKDTFAGKLKKGFPLIEKDALSGSSAHLTEGDLFDVTSEKGEFIGKGYYGLQNKG
VGWVLSRARDERIDGRFFLDKLKKAAEARAHLFKASDTTAFRLFNGEGDGIGGVTIDFYD
GYLLIQWYSKGIYAYKDSLIEAIDGLELSYKAIYEKKRFDTAGQYVEDDDFVKGERGDFP
VIVQENGIQYAVDLNDGAMTGIFLDQRHVRKAIRDKYANGRRVLNTFSYTGAFSVAAALG
GAEKTTSVDVANRSLAKTIEQFSANGIDYEAHDIKVMDVFKYFGYAEKKGLAFDLIILDP
PSFARTKKRTFSAAKDYKNLLKETIAITAKNGIIVASTNSSAFNMKKFKGFIEAAFKETN
ESYDILEEYTLPEDFKTIPAFKEGNYLKVVFLRKK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacttacagtgaaagatacatttgccggaaagctgaaaaaaggattccccctg
attgaaaaagacgctctgtccggaagctcggctcacttaacagagggcgatctttttgat
gtgacatccgagaagggcgaatttatcgggaaaggctattacggtttgcagaataaagga
gtcggctgggtgctgtcccgtgcgagagatgaacggatcgacggacgtttctttctggac
aagctgaaaaaagcggctgaagcaagggcccatctgtttaaggcgtctgatacaacggcg
ttccgtcttttcaacggtgagggcgacggcatcggcggcgtcacgattgacttctatgac
ggttatctgctgattcaatggtacagcaaaggcatttacgcatataaggacagtttgatt
gaggcgattgacgggctggagctgtcttataaggcgatctacgaaaagaaacggtttgat
accgccggacaatatgtggaagacgacgattttgtcaaaggcgaaagaggagattttccg
gtcattgttcaagaaaacgggatacagtacgctgtggatttaaacgacggggcgatgacg
ggcattttcttagaccagcgtcatgtgcgcaaagcgattcgggacaagtatgcaaacggc
agacgggtgctgaatacgttctcttatacgggagcattttccgttgcggcggcgcttgga
ggagcagagaaaacgacaagcgtcgatgtcgccaaccgcagcctggcaaaaacgattgaa
cagttcagcgccaacggaattgattatgaggcgcatgacattaaggttatggatgtattc
aaatacttcggctatgcggagaaaaaagggctggcatttgacctcatcatccttgatccg
ccttctttcgcccgcacaaaaaaacggacgttcagcgcggcgaaagattataaaaacctg
ctgaaggaaacgatcgccatcaccgcgaaaaacggcatcatcgttgcatcgacaaacagc
agcgccttcaacatgaagaaatttaaaggctttatagaggctgcctttaaagaaacaaac
gagagttacgacattttggaagaatatacgcttccggaggattttaaaacgatacccgcg
tttaaagaagggaactatttgaaggtcgttttcttgcggaaaaaatag
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