Bartonella quintana RM-11: RM11_0006
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Entry
RM11_0006 CDS
T02294
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bqr
Bartonella quintana RM-11
Pathway
bqr03030
DNA replication
bqr03410
Base excision repair
bqr03420
Nucleotide excision repair
bqr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RM11_0006
03410 Base excision repair
RM11_0006
03420 Nucleotide excision repair
RM11_0006
03440 Homologous recombination
RM11_0006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bqr03032
]
RM11_0006
03400 DNA repair and recombination proteins [BR:
bqr03400
]
RM11_0006
Enzymes [BR:
bqr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RM11_0006
DNA replication proteins [BR:
bqr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RM11_0006
DNA repair and recombination proteins [BR:
bqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RM11_0006
NER (nucleotide excision repair)
GGR (global genome repair) factors
RM11_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
13564133
NCBI-ProteinID:
AFR25754
LinkDB
All DBs
Position
3939..6845
Genome browser
AA seq
968 aa
AA seq
DB search
MKATDHLFLVDGSSYVFRAYYALPLLKRKKDGLPVGAVAGFCNMLWKLLCDARNTAIGTV
PTHFAVVFDYSSDTFRKHIYPQYKANRVAPPEDLIPQFSLIRQATKAFNLPCIEKEGFEA
DDLIATYAQLATKVGAKTTIISSDKDFMQLVNTHVSLYDGMKDKHIGISEVLEKWDVAPE
KMVDLQALTGDPTDNVPGIPGIGPKIAAQLLNQFGSLDLLLQRVAEVKQTKRRENIQAYS
EQAKISRRLVQLKTDVPIENDLDDLTLESQDGPRLIAFLKTMEFATLTRRVAEATACDAA
VIDALDLDVEWAEPVYGCDSEVKRAERALSHDFSKNTPQVLAQKRKCQALSQTIKRDAYL
SIFDEEILKKWLSEAKEQGFFAFDTETTSLDPLQAKLVGFSLALQPGKAAYVPLEHFEGG
DDLLGGGRIVGQIETRKALTLLKPILEDQAVLKIGQNIKYDWLVMKQYGVVIRCFDDTML
LSYALDVGALTHNMDALSERWLGHKPIAYKDLTHNGKKITSFAQVDLKQATLYAAEDADI
TLRLWQVLKPQLVARGMTKVYERLDRPLVEVLARMEERGILVDKQILLRLSGELAQAVFI
LEEEIYQLAGEKFNLASPKQLGDILFGKMSLPGGTKTKSGQWSTSAQTLEELAAEGHILP
RKIIDWRQLAKLKSTYADALPSYILSKTGRIHTNYSLAITSTGRLSSSEPNLQNIPVRTT
EGRKIRTAFIAPKGHMLLSADYSQIELRILAHIADITALKEAFAQGQDIHAITASQMFGV
AIEGMNSDIRRRAKAINFGIIYGISAFGLANQLGLSRQEASHYIQLYFERFPGIKDYMEM
TKNFACRNGYVETIFGRRIHYPEIKAANPQVRSFNERAAINAPIQGSAADIIRRAMIQME
DALEKEKLSAKMLLQVHDELIFEVPEDESERTMALVKKVMENATMPVLSLSVPLEVKVMA
AQNWEEAH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagatcatctttttttggttgatggatcaagctatgtctttcgtgcttac
tacgctttaccactcttaaagcgcaaaaaggatgggcttcctgtaggagctgtagcgggt
ttttgtaatatgttgtggaagctactttgtgatgcgcgtaatacagctatcggcactgtt
ccaacgcattttgctgttgtttttgactattcatctgatacttttcggaagcacatttat
ccacaatataaagccaatcgggtagcgcctccagaagatcttattcctcaattttctctc
atccgccaggcaacgaaggcttttaatttaccttgtatcgaaaaggaaggatttgaggcg
gatgatttaattgctacttatgcgcaattggcaacaaaggttggggcaaaaacaaccatt
atttcttccgataaggattttatgcaattagtcaatacacatgtatccttgtatgatgga
atgaaggacaagcacattggtatttctgaagttttagaaaaatgggatgttgcacctgaa
aaaatggtcgacttgcaagctttgactggagatccaacggataacgtaccaggtattcca
ggcattggtcctaaaattgctgctcaattgttgaatcaatttggctctcttgatcttttg
ttgcagagagtggcagaagttaagcaaacaaaacgacgtgaaaatattcaggcttatagt
gaacaagcaaaaatttctcgtagacttgttcagcttaaaacagatgtgcctatagaaaat
gatttagatgatcttactttagaatcacaagatggtccacgcttaatcgcttttcttaaa
actatggaatttgccacattaacgcgccgtgtggcagaggcaacagcatgtgatgcagca
gtcattgatgcgcttgatctagacgttgaatgggcagagcctgtgtatgggtgtgattct
gaggtaaagagagctgaaagagcactttcacatgatttttctaaaaatacaccacaagtt
ttggcacaaaaacgtaaatgccaagcgttaagccagacaatcaaaagggatgcttatcta
agcatttttgatgaagaaattttgaaaaagtggttatctgaagcaaaagagcaaggcttt
tttgcttttgatactgaaacaacgtcacttgatcctctgcaagcaaagcttgttggtttt
tcgttagcattacagccaggaaaagcggcctatgtgccacttgaacattttgagggagga
gatgaccttttgggaggtggacgcatcgttgggcagattgagacacgaaaggctttaaca
cttttaaaaccgatattagaagaccaagcagttttaaaaattggtcaaaatataaagtat
gattggttagtgatgaagcaatacggtgttgtaatacgctgttttgatgacacaatgctt
ttatcgtatgctttagatgttggagctttaacgcataatatggatgctttatctgaacgt
tggcttgggcataagccgattgcctacaaggatttaacacacaacggaaaaaagattacg
tcttttgcgcaagtggatttgaaacaggcaaccctttatgctgctgaagatgctgatata
acgctacgtttgtggcaagttttgaagcctcagcttgtggcacggggaatgacgaaggtt
tatgaacgtcttgatcgaccactcgtagaagttcttgcaagaatggaggaacgcgggatt
ctggtcgataagcagattttattgcgtctttcaggagaattagcgcaggctgtttttatt
ctagaagaagaaatttatcagctggctggtgaaaaatttaatcttgcttcgccaaagcag
ttaggagatatcctttttggcaaaatgagtttgcctggaggtacgaaaactaagagtgga
cagtggtcaacttctgcacaaaccttagaggaattagctgctgaaggtcatattttgccg
cgtaaaattattgattggcgccagctggcaaaactgaaatctacctatgcagatgctttg
ccttcttatattttatcaaaaacagggcgtattcatacgaattattctttggcgataaca
tcaacagggcggttatcatcatcagagccaaatttgcaaaatattccagtgcggactact
gaaggacgtaaaatccgaacagcttttattgctccaaaaggacatatgctactatcagcg
gattatagccagattgaattgcgtattcttgcgcatattgccgatatcacagcattaaaa
gaagcttttgcccaaggtcaggatattcacgctatcacagcatcgcaaatgtttggagtt
gcgatagaagggatgaattcagatatacgacgacgtgcgaaagcgataaattttggtatt
atttatggtatttcagcttttggattagctaatcaattgggtctttcacggcaagaagcg
agtcattatattcaactttattttgaaagatttccaggaattaaagattatatggaaatg
actaaaaattttgcatgccgaaatggttatgtagagacaatttttggacgtcgtatccat
tatccagaaataaaagcagctaatccacaagttcgttcctttaatgagcgggctgctatc
aatgcaccgattcaaggatcggcagcagatattattcgtcgtgcaatgattcaaatggaa
gatgctttggaaaaagaaaagctgtcagcaaaaatgttgctacaagtgcatgatgaactg
atttttgaagtaccagaagatgagagtgaaagaactatggctcttgttaaaaaggttatg
gaaaatgctacaatgccagttctttcgttgtctgttccgcttgaagtaaaagtaatggcc
gctcaaaattgggaggaagcacattag
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