Bartonella quintana RM-11: RM11_0612
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Entry
RM11_0612 CDS
T02294
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bqr
Bartonella quintana RM-11
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bqr03032
]
RM11_0612
03400 DNA repair and recombination proteins [BR:
bqr03400
]
RM11_0612
Enzymes [BR:
bqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RM11_0612
DNA replication proteins [BR:
bqr03032
]
Prokaryotic type
DNA Topoisomerases
RM11_0612
DNA repair and recombination proteins [BR:
bqr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RM11_0612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-GeneID:
13563486
NCBI-ProteinID:
AFR26342
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All DBs
Position
756656..759076
Genome browser
AA seq
806 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSQYKVLASFGHVRDLPAKDGSVLPDQDFSMKWDVDSAASK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDILRQKKVLKDKPVKRVVFNAITKKSV
LDAMNNPRDIDTSLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSITTDLKTIRNEGFQARLTMFNHKKIGKLDIQSQEQADQIRLMLESA
KYHTLSVEAKPTKRNPFPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGVEINGEMAGL
ITYMRTDGVQIAPEAIDSARKVIHESFGSDYVPEKPRFYSTKAKNTQEAHEAIRPTDFQR
IPNQVRNFLDSDQVKLYELIWKRAIASQMRSAEIERTTVEIEAQQGENHANLRAIGSVIR
FDGFISVYTDQRDEENNEENEITHLPQINTGETLTKEKVEAIQHSTEPPPRYSEASLIKK
LEELGIGRPSTYASTLATLSDRGYIIIDKRKLIPDVKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVLRNFWDGFNASITNIQELRITNVLDVLNITLAPLIFPEREDG
NNVRSCPLCSSGQLSLKLGRYGAFVGCSNYPECKYTRQLGTDPGEENEVMRNDEPVMLGI
DPKTGKDVSLRNGRFGPYIQVGEQKEAKRIGLPKEWQTEKMTLDKALALISLPREIGIHP
ETGKIITATIGRYGPYLAHDGKYAPLLHTDEIFDIGINRAVTVLAEKQENKTKRNRTKTS
SSASNIRGPSRWRNCHHTQWTLWPIC
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataaatatcttgga
tctcaatacaaagtcctggcatcatttggacatgttcgtgatttgcctgcaaaagatggc
tccgtcctacctgatcaagatttttctatgaaatgggatgtagattctgcggcctctaag
cgtttgaatgaaatagcaaaagcagttaaagaagctgatagccttatcttagcaacagac
cctgatcgtgaaggggaagctatttcatggcatattttagatattcttcgtcaaaaaaaa
gttttaaaggataaacctgttaaacgggttgtgttcaatgcaattaccaaaaagtctgta
cttgatgcgatgaataatccacgtgatatcgatacatcacttgtagatgcctaccttgca
cgtcgtgctctggattatctcgttggttttacactctcacctgttttatggcgtaaactc
cccggggcacgctcggctggccgcgttcaatcggttgctttgcgtattatttgtgatcgt
gaatcagaaatagaacattttatcaaagaagattattggtcgattacaacggacttgaaa
accatccgaaatgaaggttttcaagcaagactaacaatgtttaatcacaaaaagatcggc
aaacttgatattcaatctcaagaacaagcagatcagattcgccttatgttggagagcgca
aaatatcatacactcagtgttgaagcaaagcctacaaagagaaatccttttcctccgttt
acaacatccactttacagcaagcggcttcttcaaaactaggtttttcagcttctcgcacc
atgcagattgctcagaagctctatgaaggggttgaaattaatggtgaaatggcagggctt
attacctatatgcgtaccgatggtgtgcaaatagcgccagaagccattgattcagcgcga
aaagtgattcatgaatcctttggcagtgattatgttcctgaaaaaccacgtttttattca
acaaaagcaaaaaatacacaggaagcgcatgaagccatccggccaacagattttcaacgt
atccccaatcaagtacgtaattttctcgatagtgatcaggtaaaactttatgagcttata
tggaagcgcgccattgccagtcaaatgcgttctgctgaaattgaacgtacaactgttgaa
attgaagcacagcaaggagaaaaccacgcgaatctacgcgcgataggttctgttattcgt
tttgatggctttatttctgtctacactgatcaacgagatgaagaaaacaatgaagaaaat
gaaataacacatctgccacaaattaatactggtgaaacgcttacaaaagaaaaagttgaa
gccatacaacatagtacagaaccacctccccgttattctgaagcttcattaattaaaaag
cttgaagagttaggaataggtcgtccgtcaacctatgcatccacattagctacattgtct
gatcgtggatatattataattgacaaacgaaagcttatccctgatgttaagggacgtatc
gttacagcctttcttgaaaatttcttcaatcgctatgtagaatatggtttcacagcagat
cttgaggaaaaactggatcttatatcggatggaaaactttcctggaaagacgtattgcgc
aatttttgggatgggtttaatgcgtctattaccaatatccaagaattgcgtataacgaat
gtccttgatgttttaaacataacactagcacctttaatctttcctgagcgtgaggatgga
aacaatgttcgttcctgtcctctttgttcgagtggacaattatcattaaaactcggtcgt
tatggtgcatttgttggctgttctaattatcccgaatgtaaatatacacgccaacttggc
acagatccaggagaagagaacgaagtcatgcgtaatgatgaacctgttatgcttggtatc
gatcctaaaacaggaaaagatgtctctcttcgcaatggccgctttggaccatatattcaa
gttggtgaacagaaagaagctaaacgtatagggttaccaaaagaatggcaaacagaaaag
atgactcttgataaagctttagctttaatatccttgccacgtgaaattggcattcatcct
gaaacaggcaaaataatcaccgctacaattggccgctatggtccttacctcgcacatgat
ggaaaatatgctccccttctccatacagatgaaatttttgatattggcatcaatcgcgct
gttacagtgcttgccgaaaaacaagaaaacaaaacaaagcgaaacagaacaaaaactagc
agcagcgctagcaacattaggggaccatccagatggaggaactgtcaccatacgcaatgg
acgttatggcccatatgttaa
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