Bartonella quintana RM-11: RM11_0827
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Entry
RM11_0827 CDS
T02294
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bqr
Bartonella quintana RM-11
Pathway
bqr03420
Nucleotide excision repair
bqr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RM11_0827
03430 Mismatch repair
RM11_0827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqr03400
]
RM11_0827
Enzymes [BR:
bqr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RM11_0827
DNA repair and recombination proteins [BR:
bqr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RM11_0827
MMR (mismatch excision repair)
Other MMR factors
RM11_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
13563700
NCBI-ProteinID:
AFR26544
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All DBs
Position
1025997..1028492
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AA seq
831 aa
AA seq
DB search
MHSRVFSLTIFSIRFIFSFLRSLSPHSTEGVVASLRKVFLDLALKSKKDYTKGTMNNFFD
HIPFFEDESPPHKHENNPGLTAHAVSTKEKTRCDTNYLETLNPEQRQAVINTEGPLLVLA
GAGTGKTRVLTTRISHILRSGLASPKQILAVTFTNKAALEMKMRIGELIGEIVEGMPWLG
TFHSTGAKILRRHAELVDLKTNFTILDNDDVIRLLKQLIQAEGLDDKRWPARCFAMMIDS
WKNQGLSPERISESDAYSFGNGMGRKLYCSYQNRLKSLNACDFGDLLLHCISIFQNNPDI
LHDYHSKFRYILVDEYQDTNTAQYLWLRLLAQQPKGQHVNLCCVGDDDQSIYGWRGAKVD
NILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGKVLFSDQINIEEEKVKI
HAAWDSQKEARAIGEEIEQAQQAGHSLNHIAILVRASFQMREFEDWFVTLGLNYRVIGGP
RFYERMEIRDALAYLRVVVQPADDLAFERIINTPKRGLGDATLRTLYESARARDIPLFTA
AAEIIKTDELKPKARTALRSIVENFHRWQNMLQYTPHRELAEIVLDDSGYTTMWQEDRSP
EAPTRLENLKEMIRSMEQFESLHSFLEHVALIMDAENNENTDAVNIMTLHSAKGLEFETV
FLPGWEEGLFPHQRSLDENGRSGLEEERRLAYVGLTRAKKYLHIWFVSNRRIHGLWQSTL
PSRFLDELPKEHIEVVEMETSYGDYGKSHFKHHTPFYSDYSTPGWERAQKNIEGKIAQSV
FQTPSDFSINDRIFHIKFGYGYISAVDGHKLTIVFEKAGEKQVLDNFVSKA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcactccagagtattctctctcaccatctttagtattcgttttatcttttcttttttg
cgatctctgtctcctcattcaaccgaaggtgttgtggcttccttgagaaaagttttttta
gatctagcgctcaaatcaaaaaaagactacacaaaaggtacaatgaataacttttttgat
cacataccatttttcgaagatgaatcccctccccataagcatgaaaataaccctgggtta
accgcccatgctgtaagtacaaaagaaaaaacacgatgtgacactaattatttagaaaca
cttaacccagaacaacgacaagccgtcataaatacagaagggcctcttttagttcttgcg
ggtgctggtactggaaaaacacgtgttctcactacccgcatttctcatattttacgctct
gggcttgcttcccctaagcaaatactcgctgtaaccttcaccaacaaagcagcgctcgaa
atgaaaatgcgtattggtgaacttattggtgaaattgttgaaggcatgccttggcttgga
acttttcattccactggtgcaaagattttgcgccgtcacgcagaacttgttgacttaaaa
accaattttacaattcttgataacgatgatgttattcgtcttttaaaacagcttattcaa
gctgaaggattagatgataagcgttggccagcacggtgttttgcaatgatgattgattct
tggaaaaaccaaggactttctccagaacgtatttcagaaagtgatgcctattccttcggt
aacggcatgggccgtaaactttattgcagctatcaaaatcgattaaaaagtctcaatgct
tgtgatttcggcgaccttttgcttcattgtatctctatctttcaaaacaacccagatatt
cttcacgattatcattccaaattccgctatattctcgtagatgaatatcaagatacaaat
acagcgcaatatctttggcttcgccttttggcgcaacaacccaaaggacaacatgtgaac
ctttgctgtgttggtgatgatgaccaatctatttatggatggcgtggcgcgaaagtcgat
aacatattacgttttgagaaagatttccctcctgcaaaaattattcgtctagaacgcaat
tatcgctcaacatcccatattcttaaaaccgcttctcatctgatttctcataaccaagga
aggcttggaaaagtacttttttctgatcaaataaatattgaagaagaaaaagtaaaaatt
cacgcagcatgggattcgcaaaaagaagcgcgcgccatcggagaagaaattgaacaagcg
caacaagctggtcattcattaaaccatatagctatattggtgcgtgcatcatttcagatg
cgtgaatttgaagattggtttgtaacacttggtctcaattaccgcgtcattggtggacca
cgtttttatgaacgaatggaaatacgtgatgccttagcttatttacgcgttgtagtccaa
ccagctgatgatttggcttttgaacgcattatcaacacacctaaacgtggcttaggagat
gcaactttacgcaccctttatgagagtgcacgggcacgagatattcctctctttactgct
gctgctgaaataattaaaacggatgagttaaaacccaaagcacgtactgctttgcgaagc
attgtcgaaaattttcaccgctggcaaaatatgctgcaatacacaccccatagagagctt
gcagaaatagtcctagatgattccggctacacaaccatgtggcaagaagatcgctcacca
gaagcaccaacgcgactagaaaatctcaaagaaatgatccgctctatggaacaatttgaa
agccttcatagctttttagaacatgttgcactgattatggatgctgaaaacaatgaaaat
accgatgcggttaacatcatgactctgcattcagccaaagggcttgaatttgaaacagtt
tttcttcctggttgggaagaaggactctttccccatcaacgctccttggatgaaaatggc
cgttcaggattagaagaagaacgacgactagcttatgtagggctgacaagagcaaaaaaa
tatctgcatatatggtttgtatccaatcgaagaattcatggactttggcaatctacgctt
ccttctcgttttcttgatgaattaccaaaagaacatatagaagtcgtagaaatggaaaca
tcttatggtgattatgggaaatcgcattttaaacatcacactcccttttatagtgattat
tcaacaccaggatgggagcgtgcacaaaaaaacattgaaggaaaaattgcccaatcggtc
tttcagacaccctcagatttttcaatcaatgatcgtattttccacatcaaattcggttat
ggctatatctcagcagtcgatggtcataaattaaccattgtgtttgaaaaagctggagaa
aagcaagtactcgacaattttgtaagcaaagcttag
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