Bartonella quintana RM-11: RM11_1251
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Entry
RM11_1251 CDS
T02294
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bqr
Bartonella quintana RM-11
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bqr03016
]
RM11_1251
03036 Chromosome and associated proteins [BR:
bqr03036
]
RM11_1251
Transfer RNA biogenesis [BR:
bqr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RM11_1251
Prokaryotic type
RM11_1251
Chromosome and associated proteins [BR:
bqr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RM11_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Pyr_redox
DUF3631
AlaDh_PNT_C
Pyr_redox_3
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
13564124
NCBI-ProteinID:
AFR26948
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Position
complement(1582470..1584347)
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AA seq
625 aa
AA seq
DB search
MDQMQLYDVIIIGGGHAGCEAASASARSGARTALVTHKISALGTMSCNPAIGGLGKGHLV
REIDALDGLMGRAADIAGIQFRLLNRRKGPAVRGPRTQADRKLYKKAIQKFLQEQDNLIL
IEDEAVDLIVKDNCVSGVVLKKQGELFSGAVVLTTGTFLNGLIHIGDKTWAAGRMGEHSS
VQLAERLKKYDINLGRLKTGTPARLSKKTINWKCLSKQKADEDPVPFSLLTEKIEQPQIE
CAITRTNTQTHQIIRENIHRSALYSGMIEGLGPRYCPSVEDKIVKFGERDGHQIFLEPEG
LNDDTIYPNGLSTSLPEDVQVALLRTIEGLESVKILQPGYAIEYDFVNPQQLTKTLELRS
LPGLFLAGQINGTTGYEEAAAQGLLAGLNAARKVGGLNEIIISRSTAYIGVMVDDLVSRG
VSEPYRMFTSRAEFRLSLRSDNADARLTPLAQQWGIVSQKRWDFYQQKQQRLDQARSICQ
KLFLTPNQASAHGLQVNHDGIRRSAYDLLAYPHMSIERLSHFWQQLQSIDPKTVESLEIE
AQYAVYLEKQAQDISALQRDERLEIPSSLDFQTISGLSNELKTKIQKISPRSIADAQKID
GMTPAALSLIITYIQRQRREKAESA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgcaattatatgatgttattattattggaggtggtcatgctggctgtgaa
gctgcttcagcttcagcacgctctggagcacgtacagcgcttgttacacataaaatctca
gcactaggaacaatgtcgtgtaatcccgctattggcggacttggaaaaggacatctggtt
cgtgaaatagatgctttggatggtctcatggggcgagcagcggacattgctggaattcaa
tttagacttcttaataggcgcaagggaccagcagtaagaggaccgcgcacgcaagcagac
agaaaattgtacaaaaaagcaattcaaaaatttttacaagaacaagataatcttattctt
attgaagatgaagctgtcgatctgattgttaaagataattgtgtttcaggtgttgtctta
aaaaaacaaggagaacttttttctggtgctgttgttttgacaacagggacatttttaaat
ggcttgattcatattggtgataaaacatgggctgctggacgtatgggtgaacattcaagt
gtacagcttgctgaacgtttaaaaaaatatgatataaatcttggacggttaaaaacagga
acccctgcccgtcttagtaaaaaaacaattaattggaagtgtctttctaagcagaaggct
gatgaagatccagtacctttttctcttttaacagaaaaaattgaacaacctcaaattgaa
tgtgccataacacgtacaaatacacaaacacatcagattatccgtgaaaatattcaccgc
tctgctttatattctggaatgattgagggattaggaccacgttattgcccttcagtcgaa
gataaaattgttaaatttggagaacgtgatgggcatcagatttttctggaaccagaaggg
ttaaatgatgatactatttatccaaatggtctttctacctctcttcctgaggatgtacaa
gttgctttattaagaacaattgaagggttagaaagtgttaaaattttacaacctggttat
gctattgagtatgattttgttaatccacaacaattgacaaaaactttagagttacgctct
ttaccaggattgtttttagcaggccaaattaatggtacaacaggatatgaagaagctgca
gcacagggtcttctagctgggttaaatgctgcacgtaaagtggggggattaaacgagatc
attataagtcgttctacagcttatattggcgtgatggtcgatgatttggtttcacgtgga
gttagtgaaccttatagaatgtttacatcacgtgctgaatttcgtttgtctttgagatct
gataatgctgatgctcgtttaacacctttggcacagcaatggggtattgtgagtcaaaaa
cgttgggacttttatcaacaaaaacagcaacgtcttgatcaagcacgatcaatatgtcaa
aaactttttctaacgcctaatcaggcatctgctcatggattgcaagtgaatcacgatggg
attcgacgttcagcttatgatcttcttgcttatcctcacatgagtatagaacgtctttca
catttttggcaacagttacaatcaatagatcctaaaacggttgaatctttagaaattgaa
gcacaatatgcagtttatttggaaaaacaagcacaggatatttctgctcttcaacgtgac
gagcgtttagaaattccttcttctcttgattttcagacaatttcgggtctttcaaatgag
ctaaaaacgaaaattcaaaaaatatcgccgcgttcaattgctgatgcacaaaaaattgat
ggtatgacaccagcagcattatcgcttattatcacttatattcaacgccaacgacgtgaa
aaggctgaatcagcttaa
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