Bartonella quintana Toulouse: BQ05870
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Entry
BQ05870 CDS
T00181
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bqu
Bartonella quintana Toulouse
Pathway
bqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BQ05870 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bqu03019
]
BQ05870 (rne)
03009 Ribosome biogenesis [BR:
bqu03009
]
BQ05870 (rne)
Enzymes [BR:
bqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BQ05870 (rne)
Messenger RNA biogenesis [BR:
bqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BQ05870 (rne)
Ribosome biogenesis [BR:
bqu03009
]
Prokaryotic type
rRNA processing factors
BQ05870 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAF26079
UniProt:
A0A0H3LVQ8
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All DBs
Position
complement(697099..699726)
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AA seq
875 aa
AA seq
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MSNKMLIDASHPEETRVVVVHGNKIEELDFESEHKKQLKGNIYLARITRVEPSLQAAFVE
YGGNRHGFLTFSEIHPDYYQIPIADRLALLEEEEKASGGENHSDALIEETNKNKKRSRKT
KKDQKNKIMAADVENAIISDAITTDDAEEAFDSDISHDYIEMVGTEDVREELPTYQRRQG
RQYKIQEVIKRRQILLVQIIKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITN
IQDRKRLKEIVKELAVPKGMGVILRTAGANRTKAEIKRDYEYLTRLWDTVRTLTLKSTAP
CLVHEESNLIKRSIRDLYNKNINEILVSGDQGYREAKDFMRMLMPSHAKVVQPYRDLIPI
FVRNNIEIQLDKMLHPQVSLKSGGYLVINQTEALVAIDVNSGRSTKEHSVEKTALQTNLE
AAEEIARQLRLRDLAGLIVIDFIDMLEDRNVRMVEKKLKDCLKNDRARIQVGHISHFGLL
EMSRQRIRISVLESTTQPCPHCAGTGNIRSESSIALHVMRSIEEYLLHNPQYNIIVRTPV
ATALYVLNHKRNILVNLEARFKLNISIEADDNIGTQHLIISKGTIAAAFSQPPLVFENDS
KKEIKDAIVTESISTEDKTPVETNRRRRRKNRQDERNDNSLSTVYKKDDTLNDDSRRRGR
HRGRRGGRGNQENNSYQICIPYAEPVGDFAKQTLVEIKAAHRKHRVPIAKPIEFEEVESD
TQHLGIQQDETVKVDTVAKPKTRKVRSSKTLQNQQILENDQSIITQEPLEEKSTDSSIHK
VKTNKVDKSAHEVVEKTPANGKKSTRKTREKSLPDKSTQTKEISEQKTAIEEVGELTHSQ
IKETVNQSVVISSIPDDASKAKRIGWWKRRTLSKN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaatgcttatagatgcctcccacccggaggaaacacgtgttgttgttgtt
cacggaaacaaaattgaagaacttgattttgaatcagaacataaaaagcagctcaagggg
aatatttatctagcacgtattacccgtgtagagccatcgctccaagcggcttttgtcgaa
tatggtggcaaccgccatggttttttgacattttctgaaattcatcccgattattatcaa
attcctatcgctgatcgcctcgctcttcttgaagaagaagaaaaagcttctggcggagaa
aatcattcagatgctctcattgaagaaacaaacaaaaataaaaaacgctccagaaaaaca
aaaaaagatcagaaaaacaaaatcatggcagcagatgttgaaaatgctattatatctgat
gcaataacaactgatgatgcagaagaagcttttgattcagatatttctcatgactatatc
gaaatggttggtacagaagatgtacgtgaagaactccccacttatcagcgtagacaagga
cgtcagtataaaattcaagaggtcattaaacgacgtcaaattttgttggtgcaaatcatc
aaggaagagcgtggcaataagggcgctgcactcacgacgtatttatccctagcaggacgt
tattctgttttaatgcccaacacagcacgcggtggtggtatttcacgaaaaatcaccaat
atacaagatcgcaagcgtcttaaagaaattgtgaaagaattagcagttccaaagggtatg
ggagttatcctaagaactgctggagcaaatagaacaaaagctgagattaaacgcgattat
gaatatcttacacggttatgggatactgttcgcactttaacacttaaatcaactgcacca
tgccttgtccatgaagaaagcaatcttataaagcgttctatccgcgatctttacaataag
aatatcaatgaaattcttgtatctggtgatcaaggatatcgtgaagcaaaagacttcatg
cggatgctgatgccaagtcatgcaaaagttgtgcaaccttatcgcgatcttatccctatt
ttcgtgcgaaataatatcgaaattcaacttgataaaatgttgcacccacaagtttcttta
aaatctggtggttatcttgttattaatcaaacagaagcgctcgttgctattgatgtaaat
tctggacgttccaccaaagaacattctgtcgaaaaaacagcattacaaaccaatcttgaa
gccgcagaagaaatagcacgtcaattacgcttgcgtgatctcgctggtctgattgtgatt
gatttcattgatatgcttgaagatcgcaatgttaggatggttgaaaaaaagttgaaagat
tgcctaaaaaacgatcgtgcccgtattcaagttggtcacatttcacatttcggccttctg
gaaatgagtcgtcaacgtattcgtatatcggttttagaaagtacaacacaaccctgcccg
cattgtgctggaacaggaaatatacgctctgaatcatcaattgctttacatgtcatgcgc
tcaattgaggaatatcttcttcataatccgcaatataatattattgtacgcacgcccgta
gcaacggcactttatgtgttaaaccacaagcgaaatattcttgttaatttagaagcacgt
tttaagcttaatattagtattgaagcagatgataacattggaacgcaacatctcattatt
tctaaaggtacaatagcagcagcattttctcagcctccattagtttttgaaaatgacagt
aaaaaagaaattaaggatgcaatcgtaacagagagcatatccaccgaagataaaacaccc
gttgaaacaaatagacgacgtcggcgtaaaaatcggcaagatgagagaaatgacaattct
ctctccactgtttataaaaaagacgatacacttaatgatgattcccgtcgtcggggacgt
catcggggacgtcgcggcggtcgcggcaatcaggaaaataattcttatcagatttgtatt
ccttatgcagaaccagtgggagactttgctaaacagaccttggtagaaattaaagcagcg
caccgcaaacatcgtgttccaattgctaagcctattgaatttgaagaagtagaaagcgat
acacaacacttaggtatacaacaagatgaaactgtaaaagttgatacagtcgctaaacct
aaaacacgtaaagtgcgttcatcaaaaacactgcaaaatcagcaaatccttgaaaacgat
caaagtataataacacaagaacctttagaagaaaaatctacagacagttcgatacataaa
gttaaaacaaacaaagtagataaatctgctcatgaggtggtagaaaaaactcctgcaaat
ggtaaaaaatcaacacgaaaaacacgcgaaaaatcactccctgataaatcaacgcaaaca
aaagaaatatcagaacaaaaaactgcaatagaagaagttggcgaactaactcattcccaa
attaaagagacagtcaaccaatccgttgttatatcatcaatacctgatgatgcttccaaa
gctaagcgtattggttggtggaaacgcagaacactttccaaaaattaa
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